Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0145 |
Symbol | |
ID | 6275079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 176262 |
End bp | 178121 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642612190 |
Product | 4-phytase |
Protein accession | YP_001876770 |
Protein GI | 187734658 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.331033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGT TCATGATGTT CTGTGTGATG CTTTTGCTCG CCGGATGCGA TACGCGCACG AGCGTGGAAC GGGCGCAGGA GGCAGGGGTG CTCATCGTGG GCAATAATGC GGAGCCCCAG AGCTTTGACC CCCACATCGC CACTTCCGTT TCCGATTTCA AGATGATCAA TGCCGTCATG GAGGGGCTGC TGCGCGGGGA TTCCAGGGAT GACGCCGTTT TTCATCCCGC TGTGGCGGAG TCGTGGACGC ATAGTCCGGA GGCGGACAAG TGGCGTTTTT CCCTCCGGAA GGACGCCGTG TGGAGCGACG GCGTTCCTGT GACGGCCCAT GATTTCGTGT ATGCCTATCA CCGCCTGCTT CATCCGGGGT TTGGAGGGAG GTACGCGGAC ATGCTTTATC CGCTGAAGAA TGCGGAAGCC TATAACCGGA ACAGGCGCAG CCTGCTGCTG TGCGGTCCCG GTTCCCGGCT GGCTGGGGAA GAGGGGCTGG AAGAGAGGGT TCTGGCCCGG GTGGATTGGG AGAGGCTGGA TGGTATGGGA GCCGCTGAGC TGGAGGCTCT GCGGGATGAT CCTACCCTGA TGGAGTGGCC GGACGGGATG CCGGAGGAAG GAGCGCGGAA GATTGCGGCC CGGATGTTGG AGGATGTCCG GGCCGGAAAG CCGGATTTAT GGGAGGAAGC CCGCGTGGGC GTGCGCGCCG CGGATGATTA TACCCTGGAG ATGGAGCTGC GTTCTCCGAT GCCCCAGCTT CCCCTGCTGT TGCTTCACTG CACCTGGTTT CCGGTTCCCC GCCATGCCGT GGAAGCCCAC GGCGGCATGC TGGACAGGAC GGGGAAATGG ACGCGGCCCG GAGCGGCCGT AGGGAACGGA CCTTTTCTTA TGGCGGAGCA CCGTTTCAAT GATTATGTGG AGGTGCGCCG CAATCCCCGG TACCGGAACG CTTCCGCCGT CCGGCTGAAT GGAGTCCGTT TTCTTCCCAC CGTGAACGGC TTTACGGAAA CCCGCATGTT TTTCAACGGC AAGCTTCATG TCACCAACAA CGTGCCTCCG GAGATGACGG CTTACGCCCG GGAGCGCGGC GGCGATGATT TTTGCCAGGA TGATTATTAC GTGACTATTT TTTACCGTCT GAATACGTCG CGTGCGCCGC TGAATGACGC CCGGGTCAGG CGGGCCCTTT CCCTGGCGGT AGACCGGGAG GCTCTGGTGC GGGACGTGGT GTGCGGCGGC GGCCAGCCGT GCTTCGGCTT TACGCCGGAC GGCGCCGGAT ACAAGACGCC GCATGGGGTG GAGTTCAATC CGGAGAAAGC GCGTTCCCTG CTGGCCCAGG CCGGTTTTCC CGGCGGGAAG GGTTTTCCCC GGCTGGAGCT GATGACTACA TCCCGCGAAG TTCAGAAGAC GATGGCGGAA GCCATCCAGG GCATGTGGAA AAAGCATCTG GGGATTCATG TGGATATCCG TTCCTGTGAG TGGACGGCCT ACAAGTTCGC GCAGAATTCC ATGCAGTATG ATTTTAGTTC CTCCTCATGG TCCGGTGATT ATCTGGACCC TTCCAGTTTT CTGGATTTGT GGGGTTCCGC CTCCGGGAAC AATAATACGG GCTGGTTTCA TCCGGAGTAT GAACGCCTGC TGGCGGAGAG CCGCGCCACG GGAGACCAGG AGAAGCGCAT GGCCCTGCTG GCCCGTGCGG AAGCGCTGAT GCTTTCCGAA TCCCCGGTGA TTCCCCTGTA TTGGGCCAAA CGGTCCTATT TGAAGAGGCC GGAGGTGCGG GGATGGCACC CCCTGCTGCT GGATAACCAT TTGTTTGAGG ATATCAGCCT GGACGACGCC CGGGAACATG GGAAGGAGGC CGCGCCTTGA
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Protein sequence | MRLFMMFCVM LLLAGCDTRT SVERAQEAGV LIVGNNAEPQ SFDPHIATSV SDFKMINAVM EGLLRGDSRD DAVFHPAVAE SWTHSPEADK WRFSLRKDAV WSDGVPVTAH DFVYAYHRLL HPGFGGRYAD MLYPLKNAEA YNRNRRSLLL CGPGSRLAGE EGLEERVLAR VDWERLDGMG AAELEALRDD PTLMEWPDGM PEEGARKIAA RMLEDVRAGK PDLWEEARVG VRAADDYTLE MELRSPMPQL PLLLLHCTWF PVPRHAVEAH GGMLDRTGKW TRPGAAVGNG PFLMAEHRFN DYVEVRRNPR YRNASAVRLN GVRFLPTVNG FTETRMFFNG KLHVTNNVPP EMTAYARERG GDDFCQDDYY VTIFYRLNTS RAPLNDARVR RALSLAVDRE ALVRDVVCGG GQPCFGFTPD GAGYKTPHGV EFNPEKARSL LAQAGFPGGK GFPRLELMTT SREVQKTMAE AIQGMWKKHL GIHVDIRSCE WTAYKFAQNS MQYDFSSSSW SGDYLDPSSF LDLWGSASGN NNTGWFHPEY ERLLAESRAT GDQEKRMALL ARAEALMLSE SPVIPLYWAK RSYLKRPEVR GWHPLLLDNH LFEDISLDDA REHGKEAAP
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