Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0116 |
Symbol | |
ID | 6274922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 143259 |
End bp | 144851 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642612161 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001876742 |
Protein GI | 187734630 |
COG category | [R] General function prediction only |
COG ID | [COG2509] Uncharacterized FAD-dependent dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGAG GGGAAGGAAT AACGGTGGAT GTGATTCTGC CGATGGAAAA GGCCGGCAGC GAGCGCGTGC GCCGCGCTGC CGTGGCGCGG AAGCTGGGTA TTTCCCCCTC CCGTATCAAA GATGTGCGGC TGGTGAAGGA GTCCATTGAC TCCCGGCAGA AAAAAATTCT CTTCCAGCTT CGGCTGCTGG TCGGGGTGGA TAGCCCGCTG CCGCCGGAAC GTCTTCCCTC CCGGGATTAT CCGTCCGTCC GTCCCGGCTC CCCCGTGGCG CTGATCGTTG GATTCGGACC GGCCGGGATG TTCGCCGCGC TCCGCTGTTT GGAACTGGGT ATGAAGCCTG TGGTTCTGGA ACGGGGGAAG GATGTTTCCT CCCGCCGGTT TGACCTGGCT CCCATCCTGC GCCGCGGCAC GGTGATGGAG GATTCCAATT ACTGTTTTGG AGAGGGAGGG GCAGGCACGT TTTCCGACGG GAAGCTGTTT ACGCGCGCCA CCAAGAGAGG CCCCGTCCGG GAGGTTTACG AGATTTTTGT AGCCCACGGA GCGCCCAGGG AAATTTTAAC GGACGCCCAC CCGCATATCG GCTCCAATCT GTTGCCCAAT GTTGTCAAAG CCATCAGGGA ATCCATCCTT CGCGCGGGCG GGGAAATTCA TTTCAATGCC CGTGTGGAGC ATCTGCTCCG TTCTGCGGAC GGCCGCCGCA TACGCGGCGT GGCCTGCGCG GATGGCCGGG AATTTGCGGC GGATTCCGTT TTGCTGGCTA CCGGGCACAG TGCCCGGGAC GTGTACCGCA TGATGCTGGC GGAGAGGCTG GCTCTGGAAC AGAAATCCTT TGCCGTGGGT GTGCGCATTG AGCATCCCCA GGCGTTTGTT GATGCGCGCC AGTACCACCT GAATCCGGAG CAGAGGCGCC CGGAGCAGCT TCCGGCAGCC CGTTATTCCG TGACGACCAC CATCCAGGAC CGCGGCGTCC ATTCCTTCTG CATGTGTCCC GGCGGCTTCA TCGTGCCCGC CGCCACGGAG AACGATGAGG TAGTGGTCAA CGGCATGTCT CTGGCCCGGA GGGATTCTCC ATTTGCCAAT GCCGGTTTTG TAGTCAGCGT GCATACGGAA GATACGGAAC CGTTTTGCAG GGAACACGGG GTGCTGGCGG GCGTGGCGTA CCAGAAAGCG CTGGAGACGG CTTCCTGCCG TGCCGGAGGA GGCATGCAGA AAGCCCCGGC CCAGAAGGTG GAGGATTTTC TGAAAGGGCG CGTTTCTTCT TCCCTGCTGC CTACCAGCTA TCATCCCGGC ATCGTATCCC ATCCCCTTCA TGAATTGCTC CCGGAAGGGA TTGTCTGGCG CATGCGGGAG GGGCTGCGGC AGTTTGACCG TAAATGGCGG GGATTCGCCG GAGCGGACGC CCAGCTCATT GGCTGTGAGA CGCGCACCAG CTCCCCCGTG CGCATTCCAA GGGACCCCGC CACGCTGGAG CATCCCGGTC TGGAGGGCCT GTACCCATGC GGCGAAGGGG CGGGTTACGC CGGCGGCATT GTTTCCGCCG CCCTGGACGG ACGCCGTTGT GCGGAGGCCA TGGCGCAGCA GGCGACCCGC TAG
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Protein sequence | MSGGEGITVD VILPMEKAGS ERVRRAAVAR KLGISPSRIK DVRLVKESID SRQKKILFQL RLLVGVDSPL PPERLPSRDY PSVRPGSPVA LIVGFGPAGM FAALRCLELG MKPVVLERGK DVSSRRFDLA PILRRGTVME DSNYCFGEGG AGTFSDGKLF TRATKRGPVR EVYEIFVAHG APREILTDAH PHIGSNLLPN VVKAIRESIL RAGGEIHFNA RVEHLLRSAD GRRIRGVACA DGREFAADSV LLATGHSARD VYRMMLAERL ALEQKSFAVG VRIEHPQAFV DARQYHLNPE QRRPEQLPAA RYSVTTTIQD RGVHSFCMCP GGFIVPAATE NDEVVVNGMS LARRDSPFAN AGFVVSVHTE DTEPFCREHG VLAGVAYQKA LETASCRAGG GMQKAPAQKV EDFLKGRVSS SLLPTSYHPG IVSHPLHELL PEGIVWRMRE GLRQFDRKWR GFAGADAQLI GCETRTSSPV RIPRDPATLE HPGLEGLYPC GEGAGYAGGI VSAALDGRRC AEAMAQQATR
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