| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6813 |
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| Symbol | |
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| ID | 8331033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 7950817 |
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| End bp | 7951674 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644947245 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003104455 |
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| Protein GI | 256380795 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.823191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAC TGCGGCCCGA GGTCGCCGAT CCCGATCGGG AGGGCGGCCC CGAGGCGCCA
GCGCCCGCTT CCGAGGGCAC CGGGCTGGTG CAGCTGCACG AGTCGATCGC GACACTGCTC
GCCTCCAGAG GCCAGTGGCG GCAGGCCTAC CAGCACCTGC GCTCGGCGTT CGACCTGGTC
CACGCGGGGC GCGAGGAGCA GCCGAAGGTG CCGGAGCAGC TGCGCCGCGA GGTGGACCGG
CTGCGCAGGG AGCACGCGGA GGCCCGCGAG CAGAGCCTGC GGGACAGCCT GACCGACAGC
TACAACCGCC GCTACCTGGA CGAGCGCCTG GTCGCGCTGG TCGCCGAGCG GGGCGCCACG
ACGGGCGGGC TGGCCATCGC GCTGATCGAC CTCGACTGGT TCAAGCAGGT GAACGACACG
TTCGGGCACC TGCTCGGCGA CCGGGTGCTC CAGCGGGTGG TGGAGCTGCT CCAGGCGGAG
CTGCCGGAGC ACGGGTTCTG CGCCCGCTAC GGGGGCGAGG AGTTCGTCAT CGTGCTGCCC
GACGTGGACG TCACGAGTGC GATCCAGATC ACCGAAGCGG CCAGGATGCG TGTCGAGCGT
CACGCCTGGG CCTCGCTCGC CCCCGGCCTG AGGGTGACTG TCAGCATCGG CCTGGCGTAC
GAGCCTCCCG CCGCCGAGAC GCCCTCCCGC CCACCGGTGG CCCCGGAGCA GCAGTTGTTG
CGCGCCGACA GCCTCCTCTA CACGGCCAAG CAATCGGGAC GGAACGCAGT CGCCTACCGG
GAGGGCGGAC GCGTTCGGCT GGCCGGTGCT GCTTCTGGGC GACGCGGAAT CACCGAACCG
CGGGTGTCTG GTTACTGA
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| Protein sequence | MTALRPEVAD PDREGGPEAP APASEGTGLV QLHESIATLL ASRGQWRQAY QHLRSAFDLV
HAGREEQPKV PEQLRREVDR LRREHAEARE QSLRDSLTDS YNRRYLDERL VALVAERGAT
TGGLAIALID LDWFKQVNDT FGHLLGDRVL QRVVELLQAE LPEHGFCARY GGEEFVIVLP
DVDVTSAIQI TEAARMRVER HAWASLAPGL RVTVSIGLAY EPPAAETPSR PPVAPEQQLL
RADSLLYTAK QSGRNAVAYR EGGRVRLAGA ASGRRGITEP RVSGY
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