Gene Amir_6555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6555 
Symbol 
ID8330767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp7695108 
End bp7696208 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content74% 
IMG OID644946982 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003104200 
Protein GI256380540 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.381661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGACGC TGTGGAAGGC CGTGAGCGTG GTCGGCGGGG TGCTGGGCGC CGCGGCGACC 
GGCGTCGCCG TGGGCGTCGC GGCCAACCAC CGCAAGGTCA CCGGCGAGCG GAACCAGGAC 
GACCCCTTGG CCGACGAGCC CCTCGGCAGG CTGCGCCCCA CCCGCGAGTC CACGGTGGCC 
GCCGACGACG GCGTGCCCCT GTCGGCCGAG GAGGTCGACC CGGAGGACGG CGGCGAGGCC 
GAGCTGACCG TGGTTCTCGT GCACGGCTTC GCGCTCGACC GCCGCTGCTG GCACTTCCAG 
CGCCGCGACC TGGCCCGGCT GGTCGACCCG AGGGTGCGGC TGGTGCTGTA CGACCAGCGC 
AGCCACGGCC GCTCCGACCG CTCGCCCGCC GAGTCCAACA CCATCGACCA GCTGGCCCGC 
GACCTGGACG CGGTGATCCG GTCCATGGCG CCCACCGGGC CGCTGGTGCT CGTCGGGCAC 
TCCATGGGCG GCATGACGAT CATGGCGCTG GCCGAGGAGA ACCCGACCCT GTTCGCCGAG 
CGGGTGCGCG GCGTCGCGCT GGTGGGCACG GCGGCGGGCG CGGTCGGCGG CGCGGGGCTG 
CCCAAGTCGG TGCTGTCCCG GTACAACCCG GTCACCCTGG GCGTCGGCAG GCTCGCCGGG 
CTCCAGCCGA GCGCGGTGGA GTGGGCCCGG CGGCGGGCCA ACATCCTGAC CTGGAGCGGC 
ATCCGGGCGC TCGCGTTCGG CGATCGCGGC GTGCCGACCT CGCTGGTCGA CCTGATGGAC 
GAGATGATCG CCGGGATCAA GGTGTCGGTG CTCACCGAGT TCCTGGAGAC GCTGGGCACC 
CACGACCGCT ACAAGGCGCT GGCCGGCCTG CGGCACTGCG AGGTGCTGGT GGTCAGCGGC 
GACGCCGACC GGCTCACCCC GTTCTCGCAC GCGGAGCGGA TGGCCGAGGA GATGCCGCAC 
AGCGAACTGG TCCGGGCCTC CGGCGCGGGC CACATGGTGA TGATGGAGCA GGCCGAGCTC 
GTGACCGCGC ACCTGGTCGA CCTGGTGCGC CGCAGCGCGG CCGTGGAGGA CGAGGACGGG 
CGACGGTGGT GGCGAGCGTG A
 
Protein sequence
MKTLWKAVSV VGGVLGAAAT GVAVGVAANH RKVTGERNQD DPLADEPLGR LRPTRESTVA 
ADDGVPLSAE EVDPEDGGEA ELTVVLVHGF ALDRRCWHFQ RRDLARLVDP RVRLVLYDQR 
SHGRSDRSPA ESNTIDQLAR DLDAVIRSMA PTGPLVLVGH SMGGMTIMAL AEENPTLFAE 
RVRGVALVGT AAGAVGGAGL PKSVLSRYNP VTLGVGRLAG LQPSAVEWAR RRANILTWSG 
IRALAFGDRG VPTSLVDLMD EMIAGIKVSV LTEFLETLGT HDRYKALAGL RHCEVLVVSG 
DADRLTPFSH AERMAEEMPH SELVRASGAG HMVMMEQAEL VTAHLVDLVR RSAAVEDEDG 
RRWWRA