| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6487 |
|---|
| Symbol | |
|---|
| ID | 8330699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 7622770 |
|---|
| End bp | 7623723 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644946916 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003104134 |
|---|
| Protein GI | 256380474 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4586] ABC-type uncharacterized transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0112869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGG CGCGCGAGCT GTGCCGGGAG TTCACGCTCT CCCGCAAGAT CGGCCGGTTC
CGGCGGGAGC GGCGGGTCGT CACCGCCGTG GCCGGGGTCA GCTTCGACAT CGCCGAGGGC
GAGGCCGTCG GCTACGTCGG GCCCAACGGG GCGGGCAAGT CCACCACCAT CAAGATGATC
ACCGGAATCC TGGTGCCGAC GTCCGGCCGG GTGCTGGTGT CCGGCCTGGA CCCGACCAGG
AGCAGGCGCG AGGTGGCCAG GCGGCTGGGC GTGGTGTTCG GCCAGCGCAC CCAGCTGTGG
TGGGACCTGC CCCTGGTGGA CAGCTTCGAG CTGCTGCGCG CCATCTACCG GGTGGACGCG
CGCAGCTACG CGCGCAGGCT GGCCGAGTGC GCCGACCTGC TGGACCTCGG CCCGTTCCTG
GACACGCCGG TGCGGCAGCT CTCGCTCGGG CAGCGGATGC GCGGCGAGAT CACCGCGGCC
CTGCTGCACG ACCCGGAGCT GCTGGTGCTG GACGAGCCGA CGATCGGGCT GGACCTGGAG
TCGAAGGAGC GGCTGCGCGA GTTCCTGGCC GAGCTGAACG CCAAGCGCGG CACGACGCTC
CTGCTGACCA CGCACGACCT GGACGACATC GAGCGCCTGT GCCACCGGCT GGTCGTGATC
GACCGCGGCA CGGTGCTGGC CGACGGCCCG CTGAAGTACC TGCGGCACGA GGTCAGCCCG
GAGCGGGTGC TGGTCGTGGA GCTGGCCGCG CCCGCGGACC TGGCCGGGCT GCCCGGCGTC
GCGTCGGTCT CGGTCGAGCA GGGCGGGCTG CGGCAGCGGC TGGCGTTCCG GCGCGCCGAC
ACCACGGCGG CGGCGCTGAT CGCCGAGGTC GCGACGCGGG CCGAGGTGCA CGACCTGGTC
GTGGAGGAGC CGGAGATCGG AGAAGTGATC CGGCGGCTCT ACGCGCGCCG GTAG
|
|---|
| Protein sequence | MIEARELCRE FTLSRKIGRF RRERRVVTAV AGVSFDIAEG EAVGYVGPNG AGKSTTIKMI
TGILVPTSGR VLVSGLDPTR SRREVARRLG VVFGQRTQLW WDLPLVDSFE LLRAIYRVDA
RSYARRLAEC ADLLDLGPFL DTPVRQLSLG QRMRGEITAA LLHDPELLVL DEPTIGLDLE
SKERLREFLA ELNAKRGTTL LLTTHDLDDI ERLCHRLVVI DRGTVLADGP LKYLRHEVSP
ERVLVVELAA PADLAGLPGV ASVSVEQGGL RQRLAFRRAD TTAAALIAEV ATRAEVHDLV
VEEPEIGEVI RRLYARR
|
|---|
| |