Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6472 |
Symbol | fbiC |
ID | 8330683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7609384 |
End bp | 7611900 |
Gene Length | 2517 bp |
Protein Length | 838 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644946900 |
Product | FO synthase |
Protein accession | YP_003104119 |
Protein GI | 256380459 |
COG category | [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily [TIGR03550] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit [TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCGTGG ACATCCCGAT CACCCCGCCC TCTCCGGCGC CCAGCGCCGC CGCCCTGCGG CGCGCCCTGC GGCGGGCCGC CGACGGGGCC GTGCTCGACG CCACCGAGGC CGCCGTCCTG CTGCACGCGC GCGGGGACGA CCTCGACTCG TTGCTGGCCT CCGCCGCCAA GGTGCGGGAC GCCCACCTGC TCGCCGAGGG GCGGGCCGGG GTCGTCACCT ACAGCCGCAA CGCGTTCATC CCGCTCACCC GGCTCTGCCG GGACCGGTGC CACTACTGCA CGTTCGCCAC CGCCCCGCAC AAGCTCGACG CGCCCTTCCT GGAGCGCGAC GAGGTCGTCG CCATCGCCCG CGAGGCCGCC GCCGCCGGGT GCAAGGAAGC GCTCTTCACC CTCGGCGACC GGCCCGAGGA CCGGTGGCAC CAGGCCAAGG AGTGGCTCGA CGCGCGCGGC TACTCGTCCA CGCTCGACTA CCTGCGCTCG TGCGCCATCG CGGTGCTGGA GGAGACCGGG CTGCTGCCGC ACCTGAACCC CGGCGTGCTC AGCTGGGAGG AGTTCCAGCG GTTGCGGCCG GTCGCGGCCA GCATGGGGAT GATGCTGGAG ACCACCTCCG AGCGGCTCTG GAGCGAGAAG GGGCAGCCGC ACCACGGCAG CCCCGACAAG GAGCCCGCGG TGCGGCTGCG GGTGCTCACG GACGCGGGGC GGGTGAACGT GCCGTTCACC ACGGGCATCC TCATCGGCAT CGGCGAGACC ATCGCCGAGC GGGCCGAGTC GCTGCTGGCC ATGCGGGCCG TCGCGCGCCA GTACGGGCAC GTGCAGGAAG TGATCATCCA GAACTTCCGG GCCAAGTCCG ACACCGCCAT GCGCTCCACG CCGGACGCCG ACCTGAACGA GCTGGCCGCC ACGATCGCCG TCGCCCGGCT GGTCATGCCG TCCACGACCA GCGTGCAGGC CCCGCCGAAC CTGGTCGGCG ACGAGTTCGG GCTCATGCTC CGCGCCGGGA TCGACGACTG GGGCGGCGTG TCGCCGGTCA CGCCCGACCA CGTCAACCCC GAGCGGCCCT GGCCGCAGGT CGACCGGCTC GCCGAGGTCA CCCGCGAGGC CGGGTTCGAG CTGCGCGAGC GGCTCGCCGC CTACCCCCGG TACACCCGCG CCACCCCCGG CCAGTGGATC GACACCCGGC TCACCGCGCA CGTCGCCGCC CTCGCGGGCG AGGACGGGCT GGCCGTCCCG GACGCGCCCG TCGTCGGCCG CGAGTGGCAG GAGCCCGACG CGGCCGACAC CACCGGGCGC GCCGACCTGC ACACCGCCGT CGACACCGAG GGCCGCACCG GCGACCGGCG CGGCGACTTC GACAGCGTCT ACGGCGACTG GTCCGCGCTG AGCGTGCCCA AGGCCGTCGA GCGCCTCCCC GAGGACACCG CCCGCGCCCT GCGCCTGGCC GCCGACGCCC CGCACCGCCT CCTCGACGAC ACCGACGCCG CCATGGCCCT GCTCACCGCC GACGGGCCCG CCCTGGAGGC CATGGCCCGC CTCGCCGACG ACCTGCGGGC CGACGCCGTG GGCGACGACG TGACCTACGT GGTCAACCGC AACATCAACT TCTCCAACGT CTGCTACGTC GGCTGCCGCT TCTGCGCCTT CGCCCAGCGC GAGCGCGACG CGGACGCGTT CCGGCTGTCC ACCGACGAGG TCGCCGAGCG CGCCCACGAG GCGTGGCTGG AGGGCGCCAC CGAGATCTGC ATGCAGGGCG GCATCGACCC GCGGCTGCCG GTGACGTACT ACGCCGACGC CGTGCGCGCC ATCAAGCGCC GCGTTCCGGG GATGCACGTG CACGCCTTCA GCCCCATGGA GATCGTCAGC GCCGCCGCCA AGGCGGGCGC CAGCGTCCGC GACTGGCTCA CCGAGCTGCG CGAGGCCGGC CTGGACACCA TCCCCGGCAC CGCCGCCGAG ATCCTCGACG ACGACGTCCG CTGGGTCCTC ACCAAGGGCA AGCTGCCCAC CGCGACCTGG CTCGACGTCG TCGGCACCGC GCACGAGCTG GGCATCCGCT CCTCGTCCAC GATGATGTAC GGCCACGTCG ACCACCCCGG CCACTGGCTC GGCCACTTCC GCGTCCTGGC GGGCCTGCAG GACCGCACCG GCGGCCTCAC CGAGTTCGTC GGCCTGCCGT TCGTGCACCG CAACGCCCCC ATCTACCTGG CGGGCGTCGC CCGGCCCGGC CCCAGCCGCC GCGACAACCG GGCCGTGCAC GCCTTCGCCC GCATCGCGCT GCACGGCCGG GTCCCGAACA TCCAGTGCTC CTGGGTCAAG CTCGGCGACG AGGGCACCGC CGAGGTGCTG CGCGGCGGGG CCAACGACCT GGGCGGCACG CTCATGGAGG AGACCATCAG CCGCATGGCG GGCTCCGAGC ACGGCTCCGC GCGCAGCACC GCCGAGCTGG CCGCGACCGC CGCCCTCGCG GGCAGGCCCG CCCGCCAGCG CACTACGACG TACGGCCCAG CGGGGGTCGC CGGGTAG
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Protein sequence | MPVDIPITPP SPAPSAAALR RALRRAADGA VLDATEAAVL LHARGDDLDS LLASAAKVRD AHLLAEGRAG VVTYSRNAFI PLTRLCRDRC HYCTFATAPH KLDAPFLERD EVVAIAREAA AAGCKEALFT LGDRPEDRWH QAKEWLDARG YSSTLDYLRS CAIAVLEETG LLPHLNPGVL SWEEFQRLRP VAASMGMMLE TTSERLWSEK GQPHHGSPDK EPAVRLRVLT DAGRVNVPFT TGILIGIGET IAERAESLLA MRAVARQYGH VQEVIIQNFR AKSDTAMRST PDADLNELAA TIAVARLVMP STTSVQAPPN LVGDEFGLML RAGIDDWGGV SPVTPDHVNP ERPWPQVDRL AEVTREAGFE LRERLAAYPR YTRATPGQWI DTRLTAHVAA LAGEDGLAVP DAPVVGREWQ EPDAADTTGR ADLHTAVDTE GRTGDRRGDF DSVYGDWSAL SVPKAVERLP EDTARALRLA ADAPHRLLDD TDAAMALLTA DGPALEAMAR LADDLRADAV GDDVTYVVNR NINFSNVCYV GCRFCAFAQR ERDADAFRLS TDEVAERAHE AWLEGATEIC MQGGIDPRLP VTYYADAVRA IKRRVPGMHV HAFSPMEIVS AAAKAGASVR DWLTELREAG LDTIPGTAAE ILDDDVRWVL TKGKLPTATW LDVVGTAHEL GIRSSSTMMY GHVDHPGHWL GHFRVLAGLQ DRTGGLTEFV GLPFVHRNAP IYLAGVARPG PSRRDNRAVH AFARIALHGR VPNIQCSWVK LGDEGTAEVL RGGANDLGGT LMEETISRMA GSEHGSARST AELAATAALA GRPARQRTTT YGPAGVAG
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