Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6451 |
Symbol | |
ID | 8330662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7552353 |
End bp | 7553618 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644946879 |
Product | inner-membrane translocator |
Protein accession | YP_003104098 |
Protein GI | 256380438 |
COG category | [R] General function prediction only |
COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCACTT CGTTGATGAA CCCCTCCGAG GCCCCCAGCA CCGTCCCGCC GCCCCGCAAG GCGCGCAAGC TCCCCGGTTG GGCGGTCGGC CTGCTGGCCG TGGTCGGCGC GATCACGCTG CTCGCCACGA CCTCGTACCT GACCGGCGTC GCCCAGCTCA CCTCGGCGGG CACCATCCAG ACCGCCGTCG GCCTGGCGCT GCCGATCCTG CTCGCGGGCC TCGGCGGCCT GTGGGCCGAG CGCGCCGGCG TGGTCAACAT CGGCCTCGAG GGCATGATGA TCCTGGGCAC CTGGGGCGCG GCCTGGGCGG GCTACCAGTG GGGCCCGTGG CCCGCGCTGA TCGCCGCGAT CGTGTTCGGC GCCCTCGGCG GCCTGCTGCA CGCGGTCGCC ACGGTCACCT TCGGGGTGAA CCACATCGTG TCCGGCGTGG CGATCAACCT GCTCGGAGCG GGCGTCACCA AGTACCTGTC GACGCTGCTG TTCGAGCCGG TGTCCAACAA CCCGCGCGAG TCCCCGGCGG TGCCGAAGTT CGACACCTAC TCGGCGGCGG GCCTGACCGA CTGGCTGGCC GAGCTGGAGC AGCAGCAGCG GGTGGGCGTC TCGGACGTCG CGGGCATCCT GCGTGGCCTG CTCACCGGCG TCTCCCCGCT GGTGATGATC GCCGCCGCGC TCGTGGTGGC CAGCTACCTG ATCCTGTGGA AGACCCGCTT CGGCCTGCGG CTGCGGTCGG TCGGCGAGAA CCCGGTGGCC TCCGAGTCGC TCGGCGTCAA CGTGTACCTG TACAAGTACG CGGCCGTGCT GATCTCCGGC GCGCTGGCGG GCATCGCGGG CGCGACCCTG GTGCTCAACC CCGGCCAGCC CGGCTACCTG GAGGGCCAGA CCAACGGGCG CGGCTACATC GGCCTCGCCG CGATGATCTT CGGCAACTGG CGGCCCGGCG GCCTGCTCGG CGGCGCGGCC CTGTTCGGCT ACGCCGACGG CCTCCAGCTG CGCAGCGGCG GCGCCACGTT CATGTCGCTG ATCTACGGCT CGGTGCTGCT GGTCGGCGCG GTCGTGATCT GGCAGCTGTG GAAGCGGCGG TGGATCGCGG CGCTCGGCGG CGCGGTCGCG GCCGTGGCGC TGTACGCGAT CTACTTCAGC GTGGAGGAGG TGCCCAGCCA GCTCACCACG TACGCGCCGC ACCTGGTGAC CCTCGTGGTG CTGGCCGTGG CGTCCCAGCG GTTGCGGATG CCCGCGGCCG ATGGTGAGGT CTACCGCCGT GGGTGA
|
Protein sequence | MSTSLMNPSE APSTVPPPRK ARKLPGWAVG LLAVVGAITL LATTSYLTGV AQLTSAGTIQ TAVGLALPIL LAGLGGLWAE RAGVVNIGLE GMMILGTWGA AWAGYQWGPW PALIAAIVFG ALGGLLHAVA TVTFGVNHIV SGVAINLLGA GVTKYLSTLL FEPVSNNPRE SPAVPKFDTY SAAGLTDWLA ELEQQQRVGV SDVAGILRGL LTGVSPLVMI AAALVVASYL ILWKTRFGLR LRSVGENPVA SESLGVNVYL YKYAAVLISG ALAGIAGATL VLNPGQPGYL EGQTNGRGYI GLAAMIFGNW RPGGLLGGAA LFGYADGLQL RSGGATFMSL IYGSVLLVGA VVIWQLWKRR WIAALGGAVA AVALYAIYFS VEEVPSQLTT YAPHLVTLVV LAVASQRLRM PAADGEVYRR G
|
| |