| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6437 |
|---|
| Symbol | |
|---|
| ID | 8330648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7537472 |
|---|
| End bp | 7539619 |
|---|
| Gene Length | 2148 bp |
|---|
| Protein Length | 715 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644946865 |
|---|
| Product | NB-ARC domain protein |
|---|
| Protein accession | YP_003104084 |
|---|
| Protein GI | 256380424 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGACA TCCCCGCCAG CGGCAACACC GCTTCCGGGG ACGACATCGG GTCGCTGTTC
CAGGTCGGCG TCGTGCACGG CGGGGTCGTC GTCACCGGCG CCGCAGCCGC CGCCACCGGG
CCCCGCCCCC GCCAGCTCCC GCTCCGCCCT GTCCCGTTCG TCAACCGCCA GGTCGACCTC
GGCAGGCTCG ACCGCCTCCT GCGCCCCGCC CGCGCCCAGG CGGGTCCCGC CCTGCTCGTC
CTCGTCGGGG CCCCCGGCGT CGGCAAGACC GCCCTCGCGG TGCACTGGGC GCACCGCGTC
CGCGACCGGT TCGCCGACGG CGCCCTCTAC GTCGACATGC GGGGCTACGG CCCCGGCTTC
CCGCTGGACC CGTCCGCCGC GCTCGACGGC TTCCTGCGCG CCCTGGGCAC CCCGCCCGAC
CACATCCCCG ACGACGAGGC CGACCGCGCG TCCCTCTTCC GGTCCCTCCT CGACGGCAAG
CGCCTCCTCG TCGTCGTCGA CAACGCGCGC TCCCCGCACC AGGTGCGCCT CCTGCTCCCC
GCGTCTCCCC TGTGCTGCAC GGTCGTCACC AGCCGCAGCG TGCTGTCCGG GCTGGTCGTC
AGGGAAGGAG CCGCGAGGGT GACGCTGGAC GCGCTGTCCC CGGCCGAGTC GGCCGACCTG
CTCGGCGAGC TGATCGGACC GGACGAGGTG GCCGCCGACC GCCCGGCGGC CCTGCGGGTG
GCCGAGCTGT GCGGGTGCCT GCCGCTGACG CTCCGCATCG CGGGCGAGCG GGCCTCGGAG
TGGCCCGGCC CGCGCCTGCC CAGGTTGGAG GCCGAGCTGC GCGACGAGCG GCAGCGCCTG
GACGCGCTCG CCTCCCCGGA CGACGAGCTC AGCGACACCA GGGTGGTGTT CTCCTGGTCG
TACCGGGCGC TCGGCCCCGA GCTGCGCGCC GCCTTCCGCC TGCTGGGCCT GCACCCCGTG
CCGGACGTCG GCGTCGACGT CGCCGCCGCC CTGTTCGGCG TCCCGCCCGC CACCGCGACC
AGGCTGCTGC GCGAGCTGGC CTCGGTGAGC CTGGCGCAGC CGCACCTGCC CGGCCGGTTC
CGGGTGCACG ACCTGCTGCG CGAGTACGCG GCCGAGCTGG TCGCCGCGCG CGGCACGCCC
GCCGAGCGGG ACGCGGCCGT GCGCAGGTCG GCGACCTGGC TCCTGCTCCG CGCGGACCGC
GCCCGGCTGC GCATCCTCCC GCACTCGGCC ACCGCCCCTC CGCCGCCGAT CCCGGACGGG
GTGAGCGCGC CCGCGGACTT CGCCGACGAG TCCGAGGCGC TGCGCTGGCT GGAGGACGAG
CGCCCCACCC TGCTCGCCGT GCTCGACCAG CTCGTCGAGC GCGGCGAGCA CGAGCTGGTG
TGGAAGACGG CCGCCGCCGT CGACGGCTTC TTCGAGATGC GCTCCTACCG CGACGACCTC
CGGCGCACCG CGCTGCGGGC CGTCGAGGCC GCGACCGCGC TCGGCGACCA CCTCGGCGAG
GCGCTGAGCC TGCTCACCCT CGCGGACGCC TGCTGGCGCG ACGGCAGCGC CGACGAGGCC
GTCGACCGCT ACCACGCGGC GCGGGCGGCC GGACGCGCGG CGGCGCGCGA GGAGACCGGC
CGGGGCGTGC GACCGGACTG GGTGACCGGG TTCGCCGCGC GCGGCATCGG CCTGGTCCTG
ACCGACCGGG AGGACCACGC GGGAGCGCGC GGGCACTTCA CCGAGTCGCT GGAGGTGTTC
ACCGGCATCG GCGAGCGGCG CGGCGCGGGC ATGGCCCTGC TCAGCCTCGG CCAGTGCGCG
GCGGGCCTCG GCGAGTTCGC CGAGGCGGTG GCGCGCGGAA CCGAGGCCGT CCGGATCTTC
GAGGAGCTGG CCGACACCTG GACCGCGGCG TGGGGCCGCC TCGCGCTGGG CCGCAGCCTG
ATCGCGGCCG GGCGTCCGGG GGAGGCCGCC GGGCAGCTCG CGGGGGCCAC CGGGGTGTTC
CGCGCGTTCG GGGACGCGCG CAGCGAGGCG ATGAGCCTGC ACGCCCACGG CGACGCGCTC
ACGGCGACCG GCGACCCCGG CGACCGGGCG CTGTGGGAGC TGGCGGCCCA GCGCTACGAG
CAGGTCGGCG ACCCGCAGGC CGCCGGGCTC AGGGCGCGGC TCGGCTGA
|
|---|
| Protein sequence | MPDIPASGNT ASGDDIGSLF QVGVVHGGVV VTGAAAAATG PRPRQLPLRP VPFVNRQVDL
GRLDRLLRPA RAQAGPALLV LVGAPGVGKT ALAVHWAHRV RDRFADGALY VDMRGYGPGF
PLDPSAALDG FLRALGTPPD HIPDDEADRA SLFRSLLDGK RLLVVVDNAR SPHQVRLLLP
ASPLCCTVVT SRSVLSGLVV REGAARVTLD ALSPAESADL LGELIGPDEV AADRPAALRV
AELCGCLPLT LRIAGERASE WPGPRLPRLE AELRDERQRL DALASPDDEL SDTRVVFSWS
YRALGPELRA AFRLLGLHPV PDVGVDVAAA LFGVPPATAT RLLRELASVS LAQPHLPGRF
RVHDLLREYA AELVAARGTP AERDAAVRRS ATWLLLRADR ARLRILPHSA TAPPPPIPDG
VSAPADFADE SEALRWLEDE RPTLLAVLDQ LVERGEHELV WKTAAAVDGF FEMRSYRDDL
RRTALRAVEA ATALGDHLGE ALSLLTLADA CWRDGSADEA VDRYHAARAA GRAAAREETG
RGVRPDWVTG FAARGIGLVL TDREDHAGAR GHFTESLEVF TGIGERRGAG MALLSLGQCA
AGLGEFAEAV ARGTEAVRIF EELADTWTAA WGRLALGRSL IAAGRPGEAA GQLAGATGVF
RAFGDARSEA MSLHAHGDAL TATGDPGDRA LWELAAQRYE QVGDPQAAGL RARLG
|
|---|
| |