| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6418 |
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| Symbol | |
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| ID | 8330629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7513127 |
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| End bp | 7515316 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644946846 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_003104065 |
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| Protein GI | 256380405 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCCG ACTTCAGCCG GGTCGACCTC GGCGAGCCGA CCGGCGCGGA CGACCGGGCG
GGGTGGCAGG CCGCGCTGCA GGACGCCACC GGCAAGGGCG CCGACGCGCT CGCCTGGGAG
ACCCCGGAGG GCATCGGCGT CAAACCGGTC TACACCGCCG AGGACCTGGC GGGCCTGGAC
TTCCTGCGCA CCTACCCCGG CGTCCCGCCG TACCTGCGCG GCCCGTACCC GACCATGTAC
GTCAACCAGC CGTGGACCAT CCGGCAGTAC GCCGGGTTCT CCACCGCCGA GGAGTCCAAC
GCCTTCTACC GCCGCAACCT CGCGGCCGGG CAGAAGGGCC TGTCGGTCGC GTTCGACCTG
GCCACCCACC GGGGCTACGA CTCCGACCAC CCGCGCGTGG CGGGCGACGT GGGCATGGCG
GGCGTGGCCA TCGACTCCAT CTACGACATG CGCCAGCTCT TCGAGGGCAT CCCGCTGGAC
CGGATGAGCG TGTCGATGAC CATGAACGGC GCGGTGCTGC CCGTGCTGGC GCTGTACGTC
GTGGCCGCCG AGGAGCAGGG GGTGGAGCCC GCGAAGCTGG CCGGGACCAT CCAGAACGAC
ATCCTCAAGG AGTTCATGGT CCGCAACACC TACATCTACC CGCCGAGACC GTCGATGCGG
ATCATCTCCG ACATCTTCGC CTTCACCTCG CGGTCCATGC CGAAGTTCAA CTCCATCTCG
ATCTCCGGCT ACCACATGCA GGAGGCCGGG GCGACCGCCG ACCTGGAGCT GGCCTACACG
CTCGCGGACG GCGTCGAGTA CCTGCGCGCC GGTCGCGGCG CCGGTCTGGA CGTGGACGCG
TTCGCGCCCC GGCTGTCGTT CTTCTGGGCC GTGGGCATGA ACTTCTACAT GGAGGTCGCC
AAGCTCCGCG CCGCCCGGCT GCTGTGGGCC AAGCTGGTCA AGGGCTTCGA GCCGAAGTCG
CCGAAGTCGC TGTCGCTGCG CACGCACTGC CAGACCTCCG GCTGGTCGCT GACCGCGCAG
GACGTGTTCA ACAACGTCGC CCGCACCTGC GTGGAGGCGA TGGCCGCCAC CCAGGGCCAC
ACCCAGTCGC TGCACACCAA CGCCCTGGAC GAGGCGCTGG CGCTGCCCAC CGACTTCTCC
GCCCGGATCG CCCGCAACAC CCAGCTGCTG ATCCAGCAGG AGTCCGGCAC CACGCGGGTG
ATCGACCCGT GGGGCGGCAG CGCGTTCGTC GAGCGGCTCA CCCACGACCT CGCGCACCGG
GCGTGGGCGC ACATCACCGA GGTGGAGGCG GCGGGCGGCA TGGCCGCCGC GATCGACGCG
GGCATCCCCA AGCTGCGCAT CGAGGAGGCC GCCGCCCGCA CCCAGGCGCG CATCGACTCC
GGCAGGCAGC CGGTGATCGG CGTGAACAAG TACCTGGTGG ACGCGGACGA GCAGATCGAG
GTGCTCAAGG TCGACAACGC GGGCGTGCGG GCCAGCCAGC TCGCGAAGCT GGAGCGGCTG
CGCGCCGAGC GCGACCAGTC CGAGGTGGAC GCCTCGCTGG ACGCGCTCAC CCGCGCGGCG
GGCGCGGACA CCGGCGGCAC GGCGGGGAAC CTGCTGGAGC TGGCCATCTC CGCAGCCCGC
GCCAAGGCCA CGGTCGGGGA GATCTCGGAG GCCCTCGGTA AGGTCTGGGG ACGCCACTCC
GCCCAGATCA GGACCATCAC CGGCGTGTAC CGCGAGGAGG TCGGGGCCGT GTCCAACGTG
GAGGGCACCC GCGCCCAGGT CGCCGCGTTC GCCGAGGAGG AGGGCCGCCG CCCGCGCGTC
CTGGTCGCCA AGATGGGGCA GGACGGGCAC GACCGGGGCC AGAAGGTGAT CGCGACCGCG
TTCGCCGACC TCGGCTTCGA CGTCGACGTC GGCCCGCTGT TCCAGACCCC GGACGAGGTG
GCGCGCCAGG CCGTGGAGGC CGACGTGCAC GTGGTCGGCG TGTCCTCGCT GGCCGCCGGG
CACCTGACCC TGGTGCCCGC GCTGCGCGAG GCGTTGGCCG AGCTCGACCG GGACGACATC
ATGATCGTGG TCGGCGGCGT GATCCCGCCG CAGGACTTCG AGGCGCTGCG GGAGGCGGGC
GCGTCGGCGA TCTTCCCGCC CGGCACGGTC ATCGCCGAGG CCGCCGCCGA CCTGCTGCGC
GAGCTGTCGG CCAGGCTCGG GCATGGCTAG
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| Protein sequence | MIPDFSRVDL GEPTGADDRA GWQAALQDAT GKGADALAWE TPEGIGVKPV YTAEDLAGLD
FLRTYPGVPP YLRGPYPTMY VNQPWTIRQY AGFSTAEESN AFYRRNLAAG QKGLSVAFDL
ATHRGYDSDH PRVAGDVGMA GVAIDSIYDM RQLFEGIPLD RMSVSMTMNG AVLPVLALYV
VAAEEQGVEP AKLAGTIQND ILKEFMVRNT YIYPPRPSMR IISDIFAFTS RSMPKFNSIS
ISGYHMQEAG ATADLELAYT LADGVEYLRA GRGAGLDVDA FAPRLSFFWA VGMNFYMEVA
KLRAARLLWA KLVKGFEPKS PKSLSLRTHC QTSGWSLTAQ DVFNNVARTC VEAMAATQGH
TQSLHTNALD EALALPTDFS ARIARNTQLL IQQESGTTRV IDPWGGSAFV ERLTHDLAHR
AWAHITEVEA AGGMAAAIDA GIPKLRIEEA AARTQARIDS GRQPVIGVNK YLVDADEQIE
VLKVDNAGVR ASQLAKLERL RAERDQSEVD ASLDALTRAA GADTGGTAGN LLELAISAAR
AKATVGEISE ALGKVWGRHS AQIRTITGVY REEVGAVSNV EGTRAQVAAF AEEEGRRPRV
LVAKMGQDGH DRGQKVIATA FADLGFDVDV GPLFQTPDEV ARQAVEADVH VVGVSSLAAG
HLTLVPALRE ALAELDRDDI MIVVGGVIPP QDFEALREAG ASAIFPPGTV IAEAAADLLR
ELSARLGHG
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