Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6396 |
Symbol | |
ID | 8330607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 7489992 |
End bp | 7491758 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644946824 |
Product | Carbamoyl-phosphate synthase L chain ATP- binding |
Protein accession | YP_003104043 |
Protein GI | 256380383 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCACTGC GCAAGGTCCT CATCGCGAAC CGCGGCGAGA TCGCGGTCCG GGTCATCCGG GCCTGTCGGG ACGCGGGGCT CGCCAGCGTC GCGGTGTACG CCGACCCGGA CCGGGACGCC CCGTTCGCGC GGCTGGCCGA CGAGGCGTTC GCCCTCGGCG GGACGACGGC CGCCGAGACG TACCTGTCGG TGGACAAGCT GCTCGACGCG GCCAAGCGCG CCGAGGCCGA CGCGGTGCAC CCCGGTTACG GCTTCCTGTC GGAGAACGCC GACTTCGCGC AGGCCGTGAT CGACGCCGGG CTGACCTGGG TGGGGCCGTC GCCGCAGGCG ATCAGGGACC TGGGCGACAA GGTGACGGCC AGGCACATCG CGACCCGCGC GGGCGCGCCG CTGGTGCCGG GCACGAACGA CCCGGTGTCC GGGCCGGACG AGGTGGTGGC GTTCGCGCGG GAGCACGGGC TGCCGGTGGC GATCAAGGCC GCGTTCGGCG GCGGCGGGCG CGGGCTGAAG GTCGCGCGGA CGCTGGAGGA GGTCCCGGAG CTGTTCGACA GCGCCGTGCG CGAGGCGGTG ACCGCGTTCG GGCGGGGCGA GTGCTTCGTG GAGCGGTACC TGGACAAACC CCGGCACGTG GAGGCGCAGG TGCTGGCCGA CCAGCACGGC GGCGTGATCG TGGTGGGCAC GCGCGACTGC TCGTTGCAGC GGCGGCACCA GAAGCTGGTG GAGGAGGCCC CCGCGCCGTT CCTGACCGAC GAGCAGCGGG CGACGATCCA CTCGTCGGCG CGGGCGATCT GCCGCGAGGC GGGCTACCAC GGGGCCGGGA CGGTCGAGTA CCTGGTGGGC GTGGACGGGA CGATCTCGTT CCTGGAGGTC AACACCCGGT TGCAGGTGGA GCACCCGGTG AGCGAGGAGA CCTCCGGGAT CGACCTGGTG CGCGAGCAGT TCCGGATCGC CGAGGGGCTG CCGCTGCGGT TCGCCGAGGA CCCCGAGCCG CGCGGCCACT CGATCGAGTT CCGGATCAAC GGGGAGGACG CCGGGCGCGG GTTCCTGCCC GCGCCGGGCG TGGTCACCGG GTTCGCGCTG CCGTCCGGGC CGGGGGTCCG GGTGGACGCC GGGGTCGAGG CGGGCACGGT CGTGGGCGGG CAGTTCGACT CGCTGCTGGC GAAGCTGGTC GTGACCGGCG AGGACCGGGA GCAGGCGCTC CAGCGGGCGC GGCGGGCGCT GGACGAGATG GTCGTGGACG GGATGGCGAC CGTGCTGCCG TTCCACCGGG TCGTGGTGCG CGACCCCGCT TTCGTGGGGG ACGCGGACGG GTTCTCGGTG CACACGCGGT GGATCGAGAC CGAGTTCGAG AACTCGATCG CGCCGTTCGA GGGCGGCGGT GCGGTCGGGG AGGACGAGGA GCCCCGGCAG CGGGTCGTGG TGGAGGTCGG CGGGCGACGG GTCGAGGTCG TGCTGCCGGG CGACCTCGGC GGTGGCCCCG CCAGGCCCGC CGCCGACGCG ACCGCCCGCA CCAGGAAGCG GGCGCGCGCG GGTGGCGCCT CGCAGGTCTC CGGGGACGCG GTGGCCGCGC CCATGCAGGG CACGGTCGTG AAGGTCGCCG TCGAGGAGGG GCAGCGGGTG GCGGCCGGGG ACCTGGTCGC GGTGCTGGAG GCGATGAAGA TGGAGAACCC CGTGACCGCG CACAAGGCGG GCGTGGTGAC CGGGGTGGCG GTGGCGGCCG GGTCCGCCGT GACGCAGGGG GCCGTCCTGT GCGAGTTGAG GGAATAA
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Protein sequence | MPLRKVLIAN RGEIAVRVIR ACRDAGLASV AVYADPDRDA PFARLADEAF ALGGTTAAET YLSVDKLLDA AKRAEADAVH PGYGFLSENA DFAQAVIDAG LTWVGPSPQA IRDLGDKVTA RHIATRAGAP LVPGTNDPVS GPDEVVAFAR EHGLPVAIKA AFGGGGRGLK VARTLEEVPE LFDSAVREAV TAFGRGECFV ERYLDKPRHV EAQVLADQHG GVIVVGTRDC SLQRRHQKLV EEAPAPFLTD EQRATIHSSA RAICREAGYH GAGTVEYLVG VDGTISFLEV NTRLQVEHPV SEETSGIDLV REQFRIAEGL PLRFAEDPEP RGHSIEFRIN GEDAGRGFLP APGVVTGFAL PSGPGVRVDA GVEAGTVVGG QFDSLLAKLV VTGEDREQAL QRARRALDEM VVDGMATVLP FHRVVVRDPA FVGDADGFSV HTRWIETEFE NSIAPFEGGG AVGEDEEPRQ RVVVEVGGRR VEVVLPGDLG GGPARPAADA TARTRKRARA GGASQVSGDA VAAPMQGTVV KVAVEEGQRV AAGDLVAVLE AMKMENPVTA HKAGVVTGVA VAAGSAVTQG AVLCELRE
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