Gene Amir_6387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6387 
Symbol 
ID8330598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7480806 
End bp7481735 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content75% 
IMG OID644946815 
Productpyruvate carboxyltransferase 
Protein accessionYP_003104034 
Protein GI256380374 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0160856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCCC GCGAGAACGG TCTGCCGGAC ACCACCCCCG CCGACGGCCT CCCCGCCGAG 
GTCGAGATCT GGGAGGTGGG CGCGCGCGAC GGACTCCAGA ACGAGTCCAC CACCGTCCCC
CTGGACGTGA AGCTGGAGTT CCTGGACCGC CTCGCCGACG CCGGCCTGAC CACCCTGGAG
GCGACCAGCT TCGTCCACCC GAAGTGGGTC CCCCAGCTCG CCGACGCCGA GGACCTCCTG
GCCCGCCTCG ACCGCCGCCC CGGTGTCGCC TACCCGGTGC TCGTCCCCAA CGAGCGCGGC
CTCGACCGGG CGCTGCGGGC GGGCGTCGAG CACGTCGCCG TCTTCGCCAG CGCCACCGAG
TCCTTCGCCC GCCGCAACCT CAACCGCTCC CTCGACGAGC AGTTCGCCAT GGTCGACCCG
GTGATCACCC GCGCCCGCGC CGAGGGCCTC CAGGTGCGCG GCTACGTCTC CATGTGCTTC
GGCGACCCGT GGGAGGGCCC GGTCCCGCGC GAGCAGGTCG TCGCGGTCGG CAAGCGCCTG
CTCGACCTCG GCTGCCACCG CCTCTCCCTC GGCGACACCA TCGGCGTCGC CACCCCCGGC
CAGGTCACCG CGCTGCTGGC CGCGTTCGGC GACCCCGACC CGCTCGCCGT GCACTTCCAC
GACACCTACG GCCAGGCCCT CGCCAACACC CTCGCCGCGC TCCGCTCCGG CGTGCGCGTC
GTCGACTCCT CGGCGGGCGG CCTCGGCGGC TGCCCCTACG CCGAGTCCGC CACCGGCAAC
CTCGCCACCG AGGACCTGGT GTGGATGCTC GACGGCCTCG GCATCCGGCA CGGCGTCGAC
CTGGACGCGC TCGCCACCAC CAGCGCCTGG CTCGCGGACC ACCTCGACAG GCCGAGCCCG
TCCAGGGTCG TCCGGGCGCT GCGCGGCTGA
 
Protein sequence
MGARENGLPD TTPADGLPAE VEIWEVGARD GLQNESTTVP LDVKLEFLDR LADAGLTTLE 
ATSFVHPKWV PQLADAEDLL ARLDRRPGVA YPVLVPNERG LDRALRAGVE HVAVFASATE
SFARRNLNRS LDEQFAMVDP VITRARAEGL QVRGYVSMCF GDPWEGPVPR EQVVAVGKRL
LDLGCHRLSL GDTIGVATPG QVTALLAAFG DPDPLAVHFH DTYGQALANT LAALRSGVRV
VDSSAGGLGG CPYAESATGN LATEDLVWML DGLGIRHGVD LDALATTSAW LADHLDRPSP
SRVVRALRG