Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6305 |
Symbol | |
ID | 8330516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7391532 |
End bp | 7394459 |
Gene Length | 2928 bp |
Protein Length | 975 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644946736 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_003103955 |
Protein GI | 256380295 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0507355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCTGT CCCGACTGCT CCGCGCAGGC GAAGGCAAGA TGCTCAAGCG CCTGCGCAAC ATCGCAGCGC ACATCAACAA CCTCGAAGAC GACGTCGTCG ACCTCTCCGA CGCCGACCTC AGGGCCAAGA CCGAGGAGTT CCGCAAGCGC CACGCCGACG GCGAGTCGCT CGACGAGCTG CTGCCGGAGG CGTTCGCCGT CGTCCGCGAG GGCGCGAAGC GGGTGCTCGG CCAGCGGCAC TTCGACGTCC AGCTGATGGG CGGCGCGGCG CTGCACCTCG GGCAGATCTC CGAGATGCGC ACCGGTGAGG GCAAGACCCT GACCTCGGTG CTGCCCGCCT ACCTGAACGC GATCGCGGGC AAGGGCGTGC ACGTCGTCAC GACCAACGAC TACCTCGCCA AGCGCGACTC GGAGTGGATG GGCCGCATCC ACCGCTTCCT CGGCATGACC GTCGGCGCGA TCCTGTCCGA CATGACGCCG GAGCAGCGGC GCGCGGCCTA CAACGCCGAC ATCACCTACG GCACGAACAA CGAGTTCGGC TTCGACTACC TGCGCGACAA CATGGCGTGG AGCCTGGACG AGTGCGTGCA GCGCGGCCAC TTCTTCGCCG TGGTCGACGA GGTCGACTCG ATCCTCATCG ACGAGGCCCG CACGCCGCTG ATCATCTCCG GCCCGGCCGA CCAGTCGTCG CGCTGGTACC TGGAGTTCGC CCGCCTGTCC ACGCTGCTGC GCAAGGACAC CCACTACGAG ATCGACGAGC GCAAGCGCAC CGTCGGCGTC TCGGAGACCG GTGTCGCCTT CATCGAGGAC CAGCTCGGCA TCGAGAACCT CTACGAGGCG GCGAACACCC CGCTGGTCGG CTACCTGAAC AACGCCATCA AGGCGAAGGA GCTGTTCAGC AAGGACAAGG ACTACATCGT CCGCAACGGT GAAGTCATGA TCGTCGACGA GTTCACCGGC CGCGTGCTCT CGGGCCGCCG CTACAACGAG GGTATGCACC AGGCGATCGA GGCCAAGGAG GGGGTGGAGA TCAAGGCCGA GAACCAGACC CTCGCCACGA TCACCCTCCA GAACTACTTC CGCCTCTACG AGCGCATGGG CGGCATGACC GGCACCGCCG AGACCGAGGC CGCGGAGTTC TACCAGACCT ACAAGCTCGG CGTGGTCCCC ATCCCGACCA ACCGCCCGAT GAAGCGCCGC GACCAGCCGG ACCTGGTCTA CAAGTCCGAG GAGGCGAAGT TCCAGGCGGT CGCCGAGGAC ATCGCCGAGC GGCACGAGAA GGGCCAGCCG GTCCTGGTCG GCACGACCAG CGTCGAGCGC TCCGAGTACC TGTCGAAGCT GCTGGTGCGG ATGAACATCC CGCACGAGGT CCTCAACGCC AAGCACCACG ACCGCGAGGC GCTGATCATC GCCCGCGCCG GTCGCAAGGG CGCGGTCACC GTCGCGACGA ACATGGCCGG TCGAGGCACC GACATCGTGC TCGGCGGCAA CCCGGACATC CTGGCCGACC ACGAGCTGCG CGACCGCGGC CTCGACCCGG TGGAGAACGT CGACGAGTAC CAGGCGGCCT GGTCGAAGCT GATCGAGGAC GTCAAGGCCG AGGTCAAGGC CGAGAGCGAG GCGGTCCGCG ACGCGGGCGG CCTGTACGTG CTCGGCACCG AGCGCCACGA GTCCCGCCGC ATCGACAACC AGCTGCGCGG CCGCTCCGGC CGCCAGGGCG ACCCCGGCGA GTCCCGGTTC TACCTGTCGC TGCGCGACGA GCTGATGCGC CGGTTCAACG CGGCCATGGT CGAGAACGTG ATGACCCGCC TGAAGGTGCC GGACGAGCTG CCCATCGAGC ACAAGTGGGT CACCAACGCG ATCCGCAGCG CGCAGACCCA GGTCGAGCAG CAGAACTTCG AGATCCGCAA GAACGTCCTC AAGTACGACG AGGTCATGAA CGAGCAGCGC AAGGTGATCT ACGCCGAGCG CCACCGCGTC CTCGCGGGCG AGGACCTGCG CGAGCAGGTC ACCCACATGA TCAAGGACGT CACCGGCGAG TACGTCGACG GCGCCACCGC CGACGGCTAC TCCGAGGACT GGGACCTCGA CAAGCTGTGG ACGGCCCTCA AGACGCTCTA CCCGGTGTCG CTGGACGCCA AGGCGCTGCT CGACGCCGAG GACGACCTCA GCCGCGAGGA CCTGCGCGCC CGCGTGCAGG AGGACGCGCT GGAGGCGTAC GGCAACCGCG AGGCCGACAT CGACGGCCGC GTCGGCCCCG GCGCCATGCG CGAGCTGGAG CGCCGCGTGC TGCTGTCCGT GCTCGACCGC AAGTGGCGCG AGCACCTCTA CGAGATGGAC TACCTCAAGG AGGGCATCGG CCTGCGGGCG ATGGCCCAGC GCGACCCGCT GATCGAGTAC CAGCGGGAGG GCTTCGACAT GTTCAACGGC ATGTTGGAGG CGCTGAAGGA GGAGATCGTC GGCTTCCTGT TCAACCTGCA GGTCGAGGCC GCCGAGCCCG AGCCCGCCCC GGAGCCCCCG GTGCAGGTGT CGATCAGCAA CGGCGCGGGC AACCTGACCG GCAGCCGCGC CCGCGCGCGC GCCGCCGCGG CGGCCCAGGC CGAGGCGCAG CAGCAGGCCC AGGTCCAGGC CCAGCAGCAG GCGGCGGCGG CCAGGCAGCA GGAGGAGCAG CGCCGACGCG AGGCCCCGGC GGGCTCCGCG CTGGCGCAGC TGTCGGGCGC CCCGATCCCG GCCGCGCTGC GCGGCAAGGG CCTCGACCCG CGCGCGAACA CGAACCTGAC CTACACCGGT CCGGACGAGA GCGGCGACGC GGAGTCCCAC GGCAGCGCCA ACCAGGGCGG CGGCGCAGGC CAGGGCGGCA CCCGCAAGGA GCGCCGCGCC CAGGCCCGCG CCCAGGCCAA GGGCCAGCGC AACCGCCCGC AGGGCTGA
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Protein sequence | MVLSRLLRAG EGKMLKRLRN IAAHINNLED DVVDLSDADL RAKTEEFRKR HADGESLDEL LPEAFAVVRE GAKRVLGQRH FDVQLMGGAA LHLGQISEMR TGEGKTLTSV LPAYLNAIAG KGVHVVTTND YLAKRDSEWM GRIHRFLGMT VGAILSDMTP EQRRAAYNAD ITYGTNNEFG FDYLRDNMAW SLDECVQRGH FFAVVDEVDS ILIDEARTPL IISGPADQSS RWYLEFARLS TLLRKDTHYE IDERKRTVGV SETGVAFIED QLGIENLYEA ANTPLVGYLN NAIKAKELFS KDKDYIVRNG EVMIVDEFTG RVLSGRRYNE GMHQAIEAKE GVEIKAENQT LATITLQNYF RLYERMGGMT GTAETEAAEF YQTYKLGVVP IPTNRPMKRR DQPDLVYKSE EAKFQAVAED IAERHEKGQP VLVGTTSVER SEYLSKLLVR MNIPHEVLNA KHHDREALII ARAGRKGAVT VATNMAGRGT DIVLGGNPDI LADHELRDRG LDPVENVDEY QAAWSKLIED VKAEVKAESE AVRDAGGLYV LGTERHESRR IDNQLRGRSG RQGDPGESRF YLSLRDELMR RFNAAMVENV MTRLKVPDEL PIEHKWVTNA IRSAQTQVEQ QNFEIRKNVL KYDEVMNEQR KVIYAERHRV LAGEDLREQV THMIKDVTGE YVDGATADGY SEDWDLDKLW TALKTLYPVS LDAKALLDAE DDLSREDLRA RVQEDALEAY GNREADIDGR VGPGAMRELE RRVLLSVLDR KWREHLYEMD YLKEGIGLRA MAQRDPLIEY QREGFDMFNG MLEALKEEIV GFLFNLQVEA AEPEPAPEPP VQVSISNGAG NLTGSRARAR AAAAAQAEAQ QQAQVQAQQQ AAAARQQEEQ RRREAPAGSA LAQLSGAPIP AALRGKGLDP RANTNLTYTG PDESGDAESH GSANQGGGAG QGGTRKERRA QARAQAKGQR NRPQG
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