Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6285 |
Symbol | |
ID | 8330496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7373630 |
End bp | 7374421 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644946716 |
Product | protein of unknown function DUF574 |
Protein accession | YP_003103935 |
Protein GI | 256380275 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.222973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCAGAACT CCCCGAGACC GGTGTCGGAC GACCGGGACC GTCCGAACGC GGCTCGGCTG TACGACTACT ACCTCGGCGG CGCGCACAAC TTCGCCGTCG ACCGGGAGTT CGCGCTCCGC GCGGTCAGCG AGGTGCCCGC CGACGCGATG GTGCAGCACG GCCGCGCGTT CCTGCGGCGC GCCGTGAAGC TGTGCCTGGA GCGGGGCATC CGGCAGTTCC TCGACCTCGG GTCCGGCATC CCCACGGCGG GCAACGTGCA CGAGGTCGCC CACGAGGTCG ACCCGGACTG CCGCGTGGTC TACGTGGACA ACGAGCCCGC GACTGTCGCG CACGCCCGCG CCATGCTGCG CGGGCGGGAG GGCGTGGCGA TGGTGGAGGC CGACGTCCGC GACCCGGCCG CGGTGCTGGG CTCGCCGGAG TGCCGCGAGC TGCTGGACCT GACGGCGCCG GTCGCGGTGC TGATGGTGGC GATCCTGCCG TGCCTGGTGA CGGCCGACCG GCCGGAGCGG GTCGTGGCGG GGTACCGGGA CGTGATGGCG GCGGGCAGCC TGCTGGTGTT CACCCACCTC ACCGCGGACT TCCAGCCGGA GGTGGTGGAC AAGCTGCTCG GCGTGGCGAC CGACGCGCAC CCGCTCACGC CCAGGACCAA GGCGGAGGTC GAGGTGCTGC TGGACGGGTT CGAGCTGCTG GAGCCGGGAC TGGTGCTGTC GTCCAAGTGG CGGAGGGAGG GCGACGAGCC GGAGTTCGGC GTCGAGGCCG TGTCGTACGG GGCGGTGGGC TTGCGGCGCT GA
|
Protein sequence | MQNSPRPVSD DRDRPNAARL YDYYLGGAHN FAVDREFALR AVSEVPADAM VQHGRAFLRR AVKLCLERGI RQFLDLGSGI PTAGNVHEVA HEVDPDCRVV YVDNEPATVA HARAMLRGRE GVAMVEADVR DPAAVLGSPE CRELLDLTAP VAVLMVAILP CLVTADRPER VVAGYRDVMA AGSLLVFTHL TADFQPEVVD KLLGVATDAH PLTPRTKAEV EVLLDGFELL EPGLVLSSKW RREGDEPEFG VEAVSYGAVG LRR
|
| |