| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6250 |
|---|
| Symbol | |
|---|
| ID | 8330461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 7329173 |
|---|
| End bp | 7330546 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644946681 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003103900 |
|---|
| Protein GI | 256380240 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCACGACG GCAGTGGCCG CATCGTGGTG CAGGGCTTGA CCAAGCAGTT CGGTCCGGTC
GCGGCGGTGC AGAACTTGAG CTTCACGGTG GAACCGGGTT CGGTGACCGG CTTCCTCGGC
CCCAACGGGG CCGGAAAGAC TACGACGTTG CGCATGTTGC TCGGCCTGGT GACGCCCACG
GCGGGCACCG CGCTGATCAA CGGCAGGCCC TTCACCGAGC TGGGGAACCC CGGCCGCGTG
GTGGGCGCGG TGCTGGAGGC GCAGGGCGTC CACCCGTCGC GGACGGCCCG CAACCACCTG
CGGGTGTACG CGGCGGCGAT GGGCGTGCCC GACCAGCGGG CCGACCAGGT GCTCCAGCTC
GTCGGGCTGG GCGCGGCGGC CGACCGCAAG GCAGGCGGCT TCTCGCTCGG CATGAAGCAG
CGGCTGGCCC TGGCCACCGC GCTGCTCGGC GACCCGCAGA TCCTGGTGCT GGACGAGCCC
GCGAACGGCC TCGACCCCGA GGGCATCGCC TGGCTGCGCC AGTTCCTCCA GTCGTACGCG
CGCAGCGGTC GCACGGTGCT GATCTCCAGC CACCTGCTGG CCGAGGTCGA GCAGACGGTC
GACCAGGTGG TGATCGTCAG CCGGGGCCAG ACCATGTACT ACGGGTCGCT GGACCAGCTG
CGCGGCTCCC AGCAGAACCG GGTGCTGGTG CAGCCGTCCG ACCCGGCGGC GCTGGTCGCG
GCGCTGCAGG CGGACGGGCT GTCGGCGATC GAGCAGACCC CGGACGGCCG GATCGCGGTC
AGCGGGGCCG AGCCGAAGCA CATCGCGGAC GTCGCGCTGA AGGCGGGCGT GTCGGTGTAC
GGCATCCAGG AGGAACGGGT CGACCTGGAG CGGCTGTTCT TCCAGCTGAC GAGCGGCCAG
TACACGGGCG CGCCGATGCC GGGCTACCAG GCGCCGCCTC CGGGCTTCGC CCAGGCCTAC
CAGCAGCAGC CGCCGCAGCA GACCGGCTAC CACACCCCGC CCCCCGGCTA CCCGGCCCAG
CCGGGCTACC CGCAGCAGCC CCAGCAGGGC TACCAGGGGC AGCCGGGCTA CGACCCGCAG
CAGGCGTACC AGCAGCAGGC CCCGCAGGGG TACCCGCAGC AGCCGCCGCA GGGCTACCAG
CAGCAGCCGG GCTTCGACCC GCAGCAGCAG GGCTACCAGC AGCAGCCGCC GCAGGGGTAC
GACCCGCAGC AGCAGGCGTA CCAGCAGCAG GGCTACCAGC AGCCGACGTC GGGCCAGTTC
CCGGCCGCGC CGGACCACCA GGCGCCGCCG ACCCCCGACT CGCCGTACGC GCCGCCGCCC
GGCGGCAACC AGCAGGGTCA GCAGGGGCAG AGCGGTCTCG GGGGCGGTGC GTGA
|
|---|
| Protein sequence | MHDGSGRIVV QGLTKQFGPV AAVQNLSFTV EPGSVTGFLG PNGAGKTTTL RMLLGLVTPT
AGTALINGRP FTELGNPGRV VGAVLEAQGV HPSRTARNHL RVYAAAMGVP DQRADQVLQL
VGLGAAADRK AGGFSLGMKQ RLALATALLG DPQILVLDEP ANGLDPEGIA WLRQFLQSYA
RSGRTVLISS HLLAEVEQTV DQVVIVSRGQ TMYYGSLDQL RGSQQNRVLV QPSDPAALVA
ALQADGLSAI EQTPDGRIAV SGAEPKHIAD VALKAGVSVY GIQEERVDLE RLFFQLTSGQ
YTGAPMPGYQ APPPGFAQAY QQQPPQQTGY HTPPPGYPAQ PGYPQQPQQG YQGQPGYDPQ
QAYQQQAPQG YPQQPPQGYQ QQPGFDPQQQ GYQQQPPQGY DPQQQAYQQQ GYQQPTSGQF
PAAPDHQAPP TPDSPYAPPP GGNQQGQQGQ SGLGGGA
|
|---|
| |