Gene Amir_6234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6234 
Symbol 
ID8330445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp7313339 
End bp7314043 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content81% 
IMG OID644946665 
Productprotein of unknown function DUF1023 
Protein accessionYP_003103884 
Protein GI256380224 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.732833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAAGT CGATCGCGGC GCTGGCCGCG CTGCTGGTGC TGGTCGCGCC GGGTGGCGGT 
GGGCGCGAGG TGCGCCGGGT GGAGGTGCTC GGGGACCTGG CGTCCGCCGC GCACGTGGCG 
GTGGTGGTGC CCGGCTCGGA CGTGGCCGAG GCCGACTTCG ACCGCACGGT CGGCGCGATG 
GCGCGCGCGG TGCGGGCCGA GGCCGGCCGG CCGGACCTGG CGGTGGTGGC CTGGCTCGGC 
TACGAGACCC CGTCCGGGGT GGGCGTGGAC GCGGCCTCGG GCCGCCTGGC CCGCACCGGG 
GCCCACGCGC TCGCCGACTA CGCCGCCGCC CTGCCCGGCC GGGTGCACCT GCTGTGCCAC 
AGCTACGGCA CCGTCGTGTG CGGCCTCGCC GCGCGGGAGC TGGCGGGGCG GGGCGTCCCG 
GTCGCGGACG TCGCGCTCAC CGGCAGCCCC GGTGTGCGGG CGGGCTCGGC GGCGGAGCTG 
GGCGCGGGCA CGCGGGTGTG GGCGGGCCGG GCGGGCGCGG ACTGGATCGG CCGGGTGCCG 
AACGTCCGGC TGCTCGACCT CGGCCACGGC CCCGACCCCG CCGACCCGGA GTTCGGCGCG 
CGCCCCCTGC CGACCGGCGG CGTCACCGCG CACGACCGGT ACTACGCGCC GGGCACCGAG 
TCCCTGCGCG CGCTGGCCCG CGTGGCGGTC GGGGAGCGGC CGTGA
 
Protein sequence
MRKSIAALAA LLVLVAPGGG GREVRRVEVL GDLASAAHVA VVVPGSDVAE ADFDRTVGAM 
ARAVRAEAGR PDLAVVAWLG YETPSGVGVD AASGRLARTG AHALADYAAA LPGRVHLLCH 
SYGTVVCGLA ARELAGRGVP VADVALTGSP GVRAGSAAEL GAGTRVWAGR AGADWIGRVP 
NVRLLDLGHG PDPADPEFGA RPLPTGGVTA HDRYYAPGTE SLRALARVAV GERP