Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6228 |
Symbol | |
ID | 8330439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7303970 |
End bp | 7305121 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644946660 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_003103879 |
Protein GI | 256380219 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTGGACT TCCGGCTCGA CGAGGAGCAC GAGGCGCTGC GCGCCACCGT GCAGCGGTTC GCCCGCGAGG AGGTGGCGCC CGTCATCGGC GGGTTCTACG AGCGCGAGGA GTTCCCGTAC GACATCGTCG CGAAGATGGG GCGGATGGGC CTGTTCGGGC TGCCCGTGCC CGAGGAGCAC GGCGGGATGG GCGGCGACTA CTTCGCGCTC TGCCTCGCGC TGGAGGAGCT GGGGCGGGTC GACTCATCCG TCGCGATCAC CCTGGAGGCC GGGGTGTCGC TGGCGGTCAT GCCGCTGCTG CGGTTCGGCA CCGACGAGCA GAAGGCGCGC TGGCTGCCCG CGCTGGCCGC CGGTGAGGCG CTGGGGGCGT TCGGCCTGAC CGAGCCCGGC GGCGGCTCCG ACGCGGGCGC GCTGCGCACC ACCGCGCGCC TGGAGGACGG CCAGTGGGTG CTCAACGGCA CCAAGGCGTT CATCACCAAC TCGGGCACCT CGATCACCTC GCTGGTGACC GTCGCCGCCG TGACCGGCCG CAAGCCGGAC GGCCGCCCGG AGATCTCCAC GATCATCGTG CCCGCCGGGA CGCCGGGGCT GGCGGTGGGG AGCAAGTACT CCAAGGTCGG CTGGAACGCC TCGGACACGC ACGAGCTGTC GTTCCAGGAC TGCCGGGTTC CCGAGGCGAA CCTGCTCGGC GAGCGCGGGC GCGGGTACGC CCAGTTCCTG CGCACCCTCG ACGAGGGCCG GGTGGCGATC GCCGCGCTCG GCGTCGGGCT GGCGCAGGGG TGCGTGGACG AGTGCGTGCG CTACGCCAAG GAGCGGGAGG CGTTCGGCTC GCCGATCGGG CGGTACCAGG CGATCCAGTT CAAGATCGCC GACATGGAGG TGCGGGTCCA CACCGCGCGG CTGGCGTACT ACCAGGCGGC GTCGAAGATG CTCCGGGGCG AGCCGTTCAA GCGGGAGGCG GCGATCGCGA AGCTCGTGTC GTCCGAGGCG GCCATGGACA ACGCGCGCGA GGGGGCGCAG GTCTTCGGCG GGTACGGGTT CATGAACGAG TACCCGGTGG GGCGGTTCTA CCGGGACGCG AAGATCCTGG AGATCGGGGA GGGGACGAGC GAGGTGCAGC GGATGCTGAT CGCTCGGGAG CTGGGGTTGT AG
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Protein sequence | MLDFRLDEEH EALRATVQRF AREEVAPVIG GFYEREEFPY DIVAKMGRMG LFGLPVPEEH GGMGGDYFAL CLALEELGRV DSSVAITLEA GVSLAVMPLL RFGTDEQKAR WLPALAAGEA LGAFGLTEPG GGSDAGALRT TARLEDGQWV LNGTKAFITN SGTSITSLVT VAAVTGRKPD GRPEISTIIV PAGTPGLAVG SKYSKVGWNA SDTHELSFQD CRVPEANLLG ERGRGYAQFL RTLDEGRVAI AALGVGLAQG CVDECVRYAK EREAFGSPIG RYQAIQFKIA DMEVRVHTAR LAYYQAASKM LRGEPFKREA AIAKLVSSEA AMDNAREGAQ VFGGYGFMNE YPVGRFYRDA KILEIGEGTS EVQRMLIARE LGL
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