Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6186 |
Symbol | |
ID | 8330397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7249508 |
End bp | 7251280 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644946618 |
Product | ABC transporter related |
Protein accession | YP_003103837 |
Protein GI | 256380177 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCC TCGCTCCCGT GCCCGCCGCC GAACCGGCGG TGCGCGCGGG CTGGCGCTCG ATGCTGCCGC GCTGGTCGCC GAAGCTGGCG GTCGGACTCG GCCTGATCGG GGCCATCGCG CTGTTCGCGC TGCTCGGGCC GCTGCTCACC GGCGACCCGG CCACCATCCG CGACATCGGC CTCACCCCGC CCGGCGGCGA GCACTTGCTG GGCACCACCC AGACCGGCCA GGACGTGCTC GCCCAGCTCG CCCACGCCAC CGGCGGCTCG CTCAAGCTCG GGCTGACCGT CGGGGTGCTG GCCACGCTGC TGTCCGCGCT GTTCGGCATC GTCGGCACCT ACGTCGGCGG TGTGGTGGAC GAATCGTTCT CGTTGTTCTC CAACGTGATG CTGGTGATCC CGACGCTGCC CCTGGTGATC GTGATCTCCG CGTTCGTGCC CGCCGAGCAG CGCGGCGCGT GGACCATCGC CCTGGTGCTG GCCATCACCG GCTGGGCGGC GTCGGCGCGG GTGCTGCGCG CGCAGACGCT GTCCGTGCGC ACCAGGGACT ACGTGGCGGC GGCGCGCGTC GCGGGGGAGA AGCCGTGGCG GGTCATCGCC GTGGAGATCC TCCCGAACCT GCTGCCGCTG CTGGCCTCGC AGTTCGTGTA CACGGTCATC TCGGCGATCC TCAACGAGGC CGGGCTGTCG TTCCTCGGGC TGGGCGCGTC CAACTCGTCC ACCCTGGGCA CGATGCTCTA CTACGCGCAG AACGGCTTCG CGCTCCAGCG GGAGGCCTGG TGGTGGTTCG TGCCGCCGGG GCTGCTCATC GCGCTGTTCG GCTGCGGGCT CGCGCTGGTG AACTTCAGCA TCGACGAGAT CATCAACCCG AAGCTGCGCG ACGTGCCGCT GCGGGTCAAG GAGCCCGAGC GCGCCGCCGC GCCCGTGCCG CGCGCCGACG AGGACGCGGT GCTGACCGTG GAGGGGCTGT CGGTCGAGTA CCGGACCGAG CGGCCGGTGC GGGCGGTGCG GGACGTGTCG CTGACCCTGC GGCGCGGCGA GATCCTGGGA CTGGCCGGGG AGTCCGGCTG CGGCAAGACC ACGCTCGCGT ACGCGGTGAG CAGGCTGCAC CGGCCGCCCG CCGAGATCAC CGGCGGGACG GTCACGTTCC ACGGCGAGCG CGACGAGGAC GTGCTGGCGC TGAGGCCGGA GGAGCTGCGG GCGTTCCGCT GGTCCGAGCT GTCGATGGTG TTCCAGGGCG CGATGAACGC GCTGAACCCG GTGACGACGG TCCACGCGCA GCTCGACGAC GTGCTCACCA CCCACCGGCC CGGCATGGCC AAGGCCGAGC GGCGGGCCAG GTGCGCGGAG GTGCTGGGCC TGGTCGGCGT CGACCCGGCG CGGCTCGACT CGTACCCGCA CGAGCTGTCC GGCGGGATGC GGCAGCGCGT GGTGATCGCC ATGGCGCTGC TGCTGAACCC GCAGATCATG GTGATGGACG AGCCGACGAC GGCGCTGGAC GTCGTGGTGC AGCGGGGCAT CCTGCGGGAG ATCCTGCGGC TGCGCGACGA GATCGGCTTC GCGGTCCTGC TCATCACCCA CGACCTTCCG CTGCTGCTGG AGGTCGCGGA CCGGATCGCG GTGATGAAGG ACGGCGAGGT GGTGGAGCTG GCCGACGCGG AGCGGATGCG CCTGCGGCCG GAGCACCCGT ACACCAGGCA GCTGCTCGAC TCGTTCCCCA GCCTGACCGG GGAGCGCGGT TCGTTCGTGC GGAGCGGGGG GAGTTCGGCG TGA
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Protein sequence | MTTLAPVPAA EPAVRAGWRS MLPRWSPKLA VGLGLIGAIA LFALLGPLLT GDPATIRDIG LTPPGGEHLL GTTQTGQDVL AQLAHATGGS LKLGLTVGVL ATLLSALFGI VGTYVGGVVD ESFSLFSNVM LVIPTLPLVI VISAFVPAEQ RGAWTIALVL AITGWAASAR VLRAQTLSVR TRDYVAAARV AGEKPWRVIA VEILPNLLPL LASQFVYTVI SAILNEAGLS FLGLGASNSS TLGTMLYYAQ NGFALQREAW WWFVPPGLLI ALFGCGLALV NFSIDEIINP KLRDVPLRVK EPERAAAPVP RADEDAVLTV EGLSVEYRTE RPVRAVRDVS LTLRRGEILG LAGESGCGKT TLAYAVSRLH RPPAEITGGT VTFHGERDED VLALRPEELR AFRWSELSMV FQGAMNALNP VTTVHAQLDD VLTTHRPGMA KAERRARCAE VLGLVGVDPA RLDSYPHELS GGMRQRVVIA MALLLNPQIM VMDEPTTALD VVVQRGILRE ILRLRDEIGF AVLLITHDLP LLLEVADRIA VMKDGEVVEL ADAERMRLRP EHPYTRQLLD SFPSLTGERG SFVRSGGSSA
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