| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6166 |
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| Symbol | |
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| ID | 8330377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7228008 |
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| End bp | 7231118 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644946600 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003103819 |
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| Protein GI | 256380159 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family
[COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000170258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGAGCT TCGCCGTGCT GGGCCCCCTG CGGGCAGAAC TGGACCGCGG ACCCGCGGAC
CTCAAGGGCC CCCGCCACCG CGCGGTGCTG GCCAGGCTGC TGGTCGCGCG CGGCCGAACC
GTCCCCCTGG ACACCCTGGT CGCCGACCTC TGGGACGACG CCCCACCCCC GAGCGCGCGC
GGCGCCGTCC AGACCTTCGT CGGCGACCTG CGCAAGGCCC TGGAACCGGA CCGCCCACCC
CGCACCCCAC CCCACCTGCT GGTCACGGTC GCGAACGGCT ACGCGCTGCG CACCGACAAC
ACCGACGCCC ACCACTTCGA GTCCGCCGTC CACCAGGCCA AGTCCGCCCC ACCACCCCGA
GCCCGAACCC TGCTCACCAG CGCCTTGGCC CTCTGGCGCG GCCCCGCGTA CGCCGAGTTC
GCCGACCACC CCTGGGCACT GGCCGAGTCG ACCGCCCTGG AAGAGCTCCG CCTCCTGGCC
GTGGAACGCC TGGCCGAGAC CGCCCTGTCC CTGAACGCCC CCGCCGACGC CATCCCACCC
CTCACCCGGC ACGCCGCGTC CCACCCGCAC CGCGAGCACG CCGCCCACCT CCTGGCGCTG
GCCCTCTACC GCACCGGCCG CCAGGGCGAG GCCCTGGAAA CCCTGCGCCG CACCAGATCC
GCACTCCGCG CCGACCTGGG CGTGGACCCC GGCGAACCCC TGCGCGCCCT GGAAGCCGAC
ATCCTCGCCC AGTCCCGAAC CCTGCTCCCC CCGCCGCGCC CCGCCACCCC GCCGCGCCCC
GCCATCCCGC CCCGAACCGC CACCCCGCCC CGAACCGCCA CCCCACCCCT GTTCGGCCGC
GAGGAAGAAC TGGCCACCCT CACCCGAGCC GCCACCGAGG CCGTCAGAAC CCACCGCCTC
CACCACGTCC TCGTCTCAGG CGCAGCGGGT TCCGGCAAAT CCGCCCTGAC CGAAGCACTG
GCCACCCACC TGCGCGCCGA GGGCTGGTCC ACCGCCACCA CCACCTGCCC CGACCTCCCC
GGAACCCCGG CAGCCTGGCC GTGGACCGCA CTCCGCACCC ACCTGGGCCT CCCCCCGGAA
CCCGACCGCA CCCCCCGCTT CACCACCCTC CGCACCCTGT CCGCCCACCT GTCCAAGTCC
TCGCCCACGC TCCTGGTCCT GGACGACCTG CACCAGGCGG ACGAGGACAC CCTCGCCCTG
CTCACCGCCC TCCCGCCCGA GGCGGGCCCA ACCCTGGTCG TCGGCACCCA CCGGGCCACC
GACATCCCGC CCACCCTCAC CGCCGCGCTG GCCCGCCTGG CCCGAACCAC CCCGACCCGC
CTCTACCTCT CCGGCCTGGA CGAGCAGGCG GTGGCGAACC TGATCGCCAC CCACCGCCCC
CCGACGCGAC GAGCGACCAG GTCCATCCAC ACCAGGAGCG CGGGCAACCC GTTCCTGGCC
CACGAACTGG CCAAGCTGTG GGCGACCGAG GGCGACGAGG CCCTGCGCAC CGTCCCCGCA
GGCGTCCGAG ACGTCCTCCT GCACCGCCTC TCCGCCCTCC CGGAACCCGC GGGAACCCAC
CTCCGCCAAG CCGCCGTCCT GGGCCGCGAG GTCGACCTCG CGATCCTCGC CGAGCTGGCG
GGCGAAGACG TCCTGGACTC GATCGAGTCC GCGATCACCG CCGGTTTCCT GACAGAGCAC
GACGCAGACC ACGTCCACTT CACCCACGAC CTGGTCCACG AGACCGTCCG AGCCGACACC
ACGGCCCCCA GACGCGCCCG CTGGCACGTG GCCGCAGCAG AAGCCGTAGA GCGCGCCACC
CCGGACGAAC ACGAACGCAT CGCCCACCAC CTGCTGGAGG CAGCCACAAG AACAACGGCC
GCCAAAGCCG CTCACCACGC GTCCCTGGCC GCAACCAGGG CCGAACACCG CTCGGCCCCG
CACGAGGCGG CAAGGCTCTG GCGCGCCACG ATCAACTCCC TGGACCACTC CCCAACCCCA
CACCCCCAAG CCCGCCTGAC CGCCGTGATG GGCCTGGTCC GAGCCCTGGC CGTGACCGGC
GACCTGGCCG CAGCCCGCGA ACACCGAGCC GAAGCAGTCC ACCAAGCGGA GTCCCTCCCC
GACCCAGTCC ACAGGGCACG CGTAGTCGGC TCCTTCGACG TCCCAGCCCT GTGGACAACC
CCCGATGACG ACGCCCTCTC CGCGACTCTG GCCGCGTCAG CCAACCGAGC CCTGACCTCC
CTCCCCGCCA CCTACCAGGC CGAACGAGCC CGCCTCCTGG TGACCATCGC GATGGAACGA
AGGGCAGACC CAACCCACGA GGCGTCCCAA GCCGCGCAGG AGGCCGAACG CATAGCCAGA
TCCCTGGCCG ACCCCACCCT CCTAGCGCTG TCCCTGAACG CCCGCTACCT CCAGACCTTC
CACCGGGCAG GCCTGGCCCC AGCCCGCAAA TCCCTGGCAG AGGAACTCCT CACAGTCACC
TCCGCCCAAC CCGACCTGGT CGCCTTCGAG GTCCTGGCCC ACCTACTCCT GATCCAGTCC
TCAGCGGCCC TGGCAGACCT CCCCACCGCA GACCACCACG CCACCCGCGC AAACCACCTG
GCAACCCGGA ACGACCTCCC CCTGGTAACC CCGTTCACCG ACTGGTACCA GGCCCTCCGC
CTATCCCTGA CGGGCCACAA GACCAAGGCC GAAGCCGCCT ACCGGGCAGC CGCCCCGAAG
CTCACGGAAA CCCACCTCCC CGGCCTGGCC CCCGGCCTCC TCTCCCTGGC CCTGCACACC
CTGGGCGTCC CCCAACCCAC CCCGGACTGG GCCACGAACC AACCCTGGAC CGCCCCCACA
ACCCACCACA TCCCCAAGGC CCCACACGAC CACCTCTACG AACTGAGAAC CTGCCTGCAC
GCACAAGCAG CCCTGTCCAG ACCCACCAAG AACCACGAGG AACTGACCGA ACTCCACAAC
GCCCTGGCCC CAGCGGAAGA CGAACTGGCA GGCGCCACAA CGGGCCTGGT CTCCCTGGGC
CCAGTAGCCG CCTACCTGGC AGACCTCTCC CAAGCCCTGG GCGACCTCAA AGAGGCAACG
CGCCTACGCG CCAAAGCAAC CACCCTCACC ACCCGCCTGC GCACCGCCTG A
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| Protein sequence | MVSFAVLGPL RAELDRGPAD LKGPRHRAVL ARLLVARGRT VPLDTLVADL WDDAPPPSAR
GAVQTFVGDL RKALEPDRPP RTPPHLLVTV ANGYALRTDN TDAHHFESAV HQAKSAPPPR
ARTLLTSALA LWRGPAYAEF ADHPWALAES TALEELRLLA VERLAETALS LNAPADAIPP
LTRHAASHPH REHAAHLLAL ALYRTGRQGE ALETLRRTRS ALRADLGVDP GEPLRALEAD
ILAQSRTLLP PPRPATPPRP AIPPRTATPP RTATPPLFGR EEELATLTRA ATEAVRTHRL
HHVLVSGAAG SGKSALTEAL ATHLRAEGWS TATTTCPDLP GTPAAWPWTA LRTHLGLPPE
PDRTPRFTTL RTLSAHLSKS SPTLLVLDDL HQADEDTLAL LTALPPEAGP TLVVGTHRAT
DIPPTLTAAL ARLARTTPTR LYLSGLDEQA VANLIATHRP PTRRATRSIH TRSAGNPFLA
HELAKLWATE GDEALRTVPA GVRDVLLHRL SALPEPAGTH LRQAAVLGRE VDLAILAELA
GEDVLDSIES AITAGFLTEH DADHVHFTHD LVHETVRADT TAPRRARWHV AAAEAVERAT
PDEHERIAHH LLEAATRTTA AKAAHHASLA ATRAEHRSAP HEAARLWRAT INSLDHSPTP
HPQARLTAVM GLVRALAVTG DLAAAREHRA EAVHQAESLP DPVHRARVVG SFDVPALWTT
PDDDALSATL AASANRALTS LPATYQAERA RLLVTIAMER RADPTHEASQ AAQEAERIAR
SLADPTLLAL SLNARYLQTF HRAGLAPARK SLAEELLTVT SAQPDLVAFE VLAHLLLIQS
SAALADLPTA DHHATRANHL ATRNDLPLVT PFTDWYQALR LSLTGHKTKA EAAYRAAAPK
LTETHLPGLA PGLLSLALHT LGVPQPTPDW ATNQPWTAPT THHIPKAPHD HLYELRTCLH
AQAALSRPTK NHEELTELHN ALAPAEDELA GATTGLVSLG PVAAYLADLS QALGDLKEAT
RLRAKATTLT TRLRTA
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