Gene Amir_6160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6160 
Symbol 
ID8330370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7215226 
End bp7215987 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content75% 
IMG OID644946593 
Productprotein of unknown function DUF305 
Protein accessionYP_003103813 
Protein GI256380153 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGACG TGGAACGGGT CCCCGATCCG GACGACCCGC TGACCGACCC CGCCGACCCG 
ACCCCCTCGC ACGAGGGGGC GGGCGGCGGG CGCCCCACCG CCGCGCGCGC CGTGGTGATC
GGCGCGGCCG TGGTGGCCGT GCTGCTGCTG GGCGCGGCGA TCGGCCTGCT GGTGAAGGTG
CCCGGCGCGG ACACCGGCAC GACGCCGGGC CGGGACTCGG TGGACGTGGG CTTCTCGCAG
GACATGGCGG TGCACCACGT GCAGGCCGTG ACCATGTCGA ACATCGCCCT GGACCGCACC
GGGGACGACG CGGTGCGGCA GCTGGCGTTC GACATCGGCT CGACCCAGCT GGAGCAGGTC
GGCCGCATGA AGGGCTGGCT GACGCTGTGG AGGATGCCCG AGCAGCCCGC GGGCGGCACG
CACATGGCGT GGATGTCGGA GCCGGGCGCG ACCGGGCACC ACGACGGGAC CGTCGCGACC
GACGGCGCGT CCGCCGGGCG CAGCGGGCTC ATGCCGGGCA TGGCCACGTC CGAGGAGCTG
GCGAAGCTGC GCTCGCTCGG CGGGACCGAG TTCGACGTGT ACTTCCTCCA GCTGATGCTG
CGCCACCACC AGGGCGGCGC GCCGATGGCG GCCTACGGGG CCGAGCACGC CGAGCAGGAC
GCGGTGCGGA CGCTGGCGGA CAACATGCTG CGGTCGCAGA CCGGCGAGTC CGAGTACATG
GAGCACCTGC TGGCCGACCG GGGCGCCGCC CCGCTCCAGT GA
 
Protein sequence
MADVERVPDP DDPLTDPADP TPSHEGAGGG RPTAARAVVI GAAVVAVLLL GAAIGLLVKV 
PGADTGTTPG RDSVDVGFSQ DMAVHHVQAV TMSNIALDRT GDDAVRQLAF DIGSTQLEQV
GRMKGWLTLW RMPEQPAGGT HMAWMSEPGA TGHHDGTVAT DGASAGRSGL MPGMATSEEL
AKLRSLGGTE FDVYFLQLML RHHQGGAPMA AYGAEHAEQD AVRTLADNML RSQTGESEYM
EHLLADRGAA PLQ