Gene Amir_6124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6124 
Symbol 
ID8330334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp7179369 
End bp7180028 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content69% 
IMG OID644946557 
Producthypothetical protein 
Protein accessionYP_003103777 
Protein GI256380117 
COG category[L] Replication, recombination and repair 
COG ID[COG1637] Predicted nuclease of the RecB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCCTCG TCATCGCTCA CTGCCAGGTC GACTACGTCG GACGCCTCAC GGCACACCTG 
CCGCCCGCCC AGCGGCTGCT GCTGATCAAG GCCGACGGCT CGGTGTCGAT CCACTCGGAC 
GACCGGGCGT ACAAGCCGCT GAACTGGATG AGCCCGCCGT GCTGGCTCAT CGAGGACCCC 
GACGTGTGGG TCGTGCAGAA CAAGGCCGGC GAGAAGCTGA TCATCACCCT GCACGAGGTG 
CTGCACGACT CCAAGCACGA GCTCGGCCCG GAACCCGGCC TGGTGAAGGA CGGCGTCGAG 
GCCGACCTGC AGAAGCTGCT CGCCCAGCAC GTGACCACCC TCGGCGACGG CTGGACCCTG 
GTCCGCCGCG AGTTCCCGAC CGCGATCGGG CCGGTGGATT TGATGTGCCG CGACTCGGAC 
GGGAAGTCGG TCGCGGTGGA GATCAAGCGG CGCGGCGAGA TCGACGGGGT GGAGCAGCTG 
ACCAGGTACC TGGAACTGCT CAACCGGGAC CCGCTGCTGG CGCCGGTGCG GGGGGTGTTC 
GCGGCGCAGC AGATCAAGCC GCAGGCCCGG ACGCTGGCGG AGGACCGGGG GATCCGGTGC 
GTGGTGCTGG ACTACGACGC GCTGCGGGGG ATCGAACCGG ACGAGTTCCG GTTGTTCTGA
 
Protein sequence
MRLVIAHCQV DYVGRLTAHL PPAQRLLLIK ADGSVSIHSD DRAYKPLNWM SPPCWLIEDP 
DVWVVQNKAG EKLIITLHEV LHDSKHELGP EPGLVKDGVE ADLQKLLAQH VTTLGDGWTL 
VRREFPTAIG PVDLMCRDSD GKSVAVEIKR RGEIDGVEQL TRYLELLNRD PLLAPVRGVF 
AAQQIKPQAR TLAEDRGIRC VVLDYDALRG IEPDEFRLF