Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6073 |
Symbol | |
ID | 8330283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 7129983 |
End bp | 7131797 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644946506 |
Product | trehalose synthase |
Protein accession | YP_003103726 |
Protein GI | 256380066 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.887339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGACG AGGAACCCCG ACCCGACGCG GCACTCGGTC TGGACGGCAT CCCGCACACC GGTGAGGCCA TCGGTGCCGA CGGGCTGCTG GTCGAACCCC AGGCCGAGGA CTTCAAATCG GCCAGGGAGG TGCCGCGCGA CCAGGCCTGG TACAAGGGCG CGGTGTTCTA CGAGGTGCTG GTGCGCGCCT TCTCCGACTC GAACGGGGAC GGCACCGGCG ACCTGAGGGG TCTGGCCTCG CGGCTGGACT ACCTGGAGTG GCTCGGCGTC GACTGCCTCT GGCTGCCGCC GTTCTACGCC TCGCCGCTGC GCGACGGCGG CTACGACATC AGCGACTTCC GGGCGGTGCT GCCGGAGTTC GGCACCGTCG ACGACTTCGT GTACCTGCTG GACGAGGCGC ACCGCCGGGG CATCCGGGTG ATCACCGACC TGGTGCTCAA CCACACCTCG GACGCGCACC CGTGGTTCCA GCAGTCGCGC GCCGAGCCGG ACGGCCCGTA CGGCGAGTAC TACGTGTGGA GCGACGACGA CTCGCGCTAC GCGGACGCGC GCGTCATCTT CGTGGACACC GAGTCCTCGA ACTGGACGTA CGACCCGGTG CGCGGCCAGT TCTTCTGGCA CCGGTTCTTC TCGCACCAGC CGGACCTCAA CTTCGAGAAC CCGGACGTGC AGGAGGCGAT GCTCGACATC CTGCGGTTCT GGCTGGACCT GGGCATCGAC GGGTTCCGCC TGGACGCCGT GCCCTACCTG TTCGAGCAGG AGGGCACGAA CTGCGAGAAC CTGCCGCGCA CGCACGACTT CCTCAAGCGC TGCCGCAAGG TCGTCGACGA CGAGTACCCC GGCCGGGTGC TGCTGGCCGA GGCGAACCAG TGGCCCGCGG ACGTGGTGGA GTACTTCGGC GACCCCGAGG TGGGCGGCGA CGAGTGCCAC ATGGCGTTCC ACTTCCCGCT GATGCCGCGC ATCTTCATGG CGGTGCGCCG CGAGTCCCGC TTCCCGATCT CGGAGATCCT GGCCCAGACG CCGAGCATCC CGGACGGCTC CCAGTGGGGC ATCTTCCTGC GCAACCACGA CGAGCTGACC TTGGAGATGG TCACCGACGA GGAGCGCGAC TACATGTACG CGGAGTATGC CAAGGACCCG CGGATGAAGG CGAACATCGG CATCCGCCGC AGGCTGGCCC CGCTGCTGGA GAACGACCGG AACCAGCAGG AGCTGTTCAC GGCGATGCTG CTGTCGCTGC CCGGCTCGCC GGTGCTGTAC TACGGCGACG AGATCGGCAT GGGCGACAAC ATCTGGCTGG GCGACCGCGA CGGCGTGCGC ACCCCGATGC AGTGGACGCC CGACCGGAAC GCGGGCTTCT CCGGCTGCGA TCCGGGTCGG CTGTACCTGC CGGTGATCAT GGACCCGGTG TACGGCTACC AGGCGCTCAA CGTCGAGGCG CAGCTGAACA ACCAGTCCTC GCTGCTGAAC TGGACCCGGC GGATGATCGA GATCCGCAAG CAGCACCACG CGTTCGCGGA GGGCGACTTC GACGACCTGG GCGGCTCGAA CCCGAGCGTG CTGGCCTACC GGCGGCGCTG GGCGCGGCCG GACGGCCAGG AGGACATCGT GCTGTGCGTG AACAACCTGT CCCGGTTCCC GCAGCCCGTC GAGCTGGACC TGGGCGAGCA CCGGGGGCTG CGCCCGGTGG AGCTGACCGG CGGGGTGCGC TTCCCGCAGA TCGGCGAGCT GTCCTACCTG CTCACCCTGC CGGGGCACGG CTTCTACTGG TTCCAGCTCG TGGCGGCGGG CGACGACGGC GAAAGCAGCA GGTGA
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Protein sequence | MHDEEPRPDA ALGLDGIPHT GEAIGADGLL VEPQAEDFKS AREVPRDQAW YKGAVFYEVL VRAFSDSNGD GTGDLRGLAS RLDYLEWLGV DCLWLPPFYA SPLRDGGYDI SDFRAVLPEF GTVDDFVYLL DEAHRRGIRV ITDLVLNHTS DAHPWFQQSR AEPDGPYGEY YVWSDDDSRY ADARVIFVDT ESSNWTYDPV RGQFFWHRFF SHQPDLNFEN PDVQEAMLDI LRFWLDLGID GFRLDAVPYL FEQEGTNCEN LPRTHDFLKR CRKVVDDEYP GRVLLAEANQ WPADVVEYFG DPEVGGDECH MAFHFPLMPR IFMAVRRESR FPISEILAQT PSIPDGSQWG IFLRNHDELT LEMVTDEERD YMYAEYAKDP RMKANIGIRR RLAPLLENDR NQQELFTAML LSLPGSPVLY YGDEIGMGDN IWLGDRDGVR TPMQWTPDRN AGFSGCDPGR LYLPVIMDPV YGYQALNVEA QLNNQSSLLN WTRRMIEIRK QHHAFAEGDF DDLGGSNPSV LAYRRRWARP DGQEDIVLCV NNLSRFPQPV ELDLGEHRGL RPVELTGGVR FPQIGELSYL LTLPGHGFYW FQLVAAGDDG ESSR
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