Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6021 |
Symbol | |
ID | 8330231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7069844 |
End bp | 7071679 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644946454 |
Product | acetolactate synthase 1 catalytic subunit |
Protein accession | YP_003103674 |
Protein GI | 256380014 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.265007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGCG CAACCTCGCG ACCGGCCCCC GGTGAGCCGC TGTCGCCCCG CCCTGGACCC CGGCCCAAGC CGGCGCCCCC GAGCGGCGCG CCCGTCCGCG TGACGGGCGC CCAGTCCCTC GTCCGCTCCC TTGAGGCGGT CGGCTGCGAG ATCGTGTTCG GCATCCCCGG CGGCACCATC CTCCCCGCGT ACGACCCGCT CCTGGACTCC ACCAAGGTCC GCCACGTCCT GGTGCGCCAC GAGCAGGGCG CGGGCCACGC CGCCACCGGC TACGCCCAGG CCACCGGCCG CGTCGGCGTC TGCATGGCCA CCTCCGGTCC CGGCGCGACG AACCTGGTGA CGCCGCTGGC CGACGCCAAC ATGGACTCGG TCCCGGTCGT CGCCATCACC GGCCAGCAGT CCCGCCCGCT CATCGGCACC GACGCGTTCC AGGAAGCCGA CATCTGCGGC ATCACGATGC CGATCACCAA GCACAACTTC CTGGTCACCG ACCCGGCGGA CATCCCGAGG GCGATCGCCG AGGCGTTCCA CATCGCCGCC ACCGGCCGCC CCGGCCCGGT CCTGGTGGAC ATCCCCAAGG ACGTCCTGCA GGAGACCACC TCCTTCTCCT GGCCGCCGGA GCTGCGGCTG CCCGGCTACC GGCCGACCAC CCGCCCGCAC GGCAAGCAGG TCCGCGAGGC CGCGAAGCTC GTCGCCGCCG CCCGCCGCCC GGTGCTGTAC GTCGGCGGCG GCGTCATCAA GGCCGAGGCC TCCGCCGAGC TGCTGCGCCT GGCCGAGGAG AACGACATCC CGGTCGTCAC CACCCTGATG GCGCGCGGCG CGTTCCCCGA CTCGCACCGC CAGCACCTGG GGATGCCGGG GATGCACGGC ACGGTCTCCG CCGTCGCCGC GATGCAGAAG GCCGACCTGC TGATCGCGCT CGGCGCGCGC TTCGACGACC GGGTCACCGG CCAGCTGGAG TCCTTCGCGC CCGAGGCGCA GGTCGTGCAC GCCGACATCG ACCCGGCCGA GATCTCGAAG AACCGCCGCG CGGACGTGCC GATCGTCGGC GACTGCAAGG AGATCATCAC CGAGCTGATC GACGCCGTCG CCAACGAGAA GGCGCACGGG CACGCCGCCG ACCTGACCCC GTGGTGGGAG CTGATCGACT CCTGGCGCGG CACGTTCCCG CTGGGCTACG ACTGGCCGGA CGACGGCACG CTGTCCCCGC AGTACGTGAT CGAGCGGATC GGCGCGCTGT CCCCGGACGC GGTCTACACG GCGGGCGTCG GCCAGCACCA GATGTGGGCG GCGCAGTTCG TCAAGTACGA GAGCCCGCGC ACCTGGATCA ACTCCGGCGG CCTCGGCACG ATGGGCTACG CGGTCCCGGC GGCCATGGGC GCCAAGGCGG GCGTGCCCGA CCGCACGGTC TGGGCGATCG ACGGCGACGG CTGCTTCCAG ATGACCAACC AGGAGCTGGC GACCTGCGCG ATCGAGGGCA TCCCGATCAA GGTCGCGGTC ATCAACAACG GCAACCTGGG CATGGTCCGG CAGTGGCAGA CGCTGTTCTA CGGCGAGCGC TACTCCAACA CCGACCTGGG CACCCACAAG CACCGCATCC CCGACTTCAA GCTGCTCGCC GAGGCCATGG GCTGCGCGGG CCTGCGCGCC GAGTCGCGCG AGGAGGTCGA CGCGGTCATC AAGCAGGCCC TGGAGATCAA CGACCGGCCG GTCGTCATCG ACTTCACCGT CGGCAAGGAC GCCCAGGTGT GGCCGATGGT CGCCGCGGGC ACCGGCAACA GCGAGATCAT GGCCGCCCGA GGCATCCGCC CGCTGTTCGA GGAAGACGAT GTCTGA
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Protein sequence | MTSATSRPAP GEPLSPRPGP RPKPAPPSGA PVRVTGAQSL VRSLEAVGCE IVFGIPGGTI LPAYDPLLDS TKVRHVLVRH EQGAGHAATG YAQATGRVGV CMATSGPGAT NLVTPLADAN MDSVPVVAIT GQQSRPLIGT DAFQEADICG ITMPITKHNF LVTDPADIPR AIAEAFHIAA TGRPGPVLVD IPKDVLQETT SFSWPPELRL PGYRPTTRPH GKQVREAAKL VAAARRPVLY VGGGVIKAEA SAELLRLAEE NDIPVVTTLM ARGAFPDSHR QHLGMPGMHG TVSAVAAMQK ADLLIALGAR FDDRVTGQLE SFAPEAQVVH ADIDPAEISK NRRADVPIVG DCKEIITELI DAVANEKAHG HAADLTPWWE LIDSWRGTFP LGYDWPDDGT LSPQYVIERI GALSPDAVYT AGVGQHQMWA AQFVKYESPR TWINSGGLGT MGYAVPAAMG AKAGVPDRTV WAIDGDGCFQ MTNQELATCA IEGIPIKVAV INNGNLGMVR QWQTLFYGER YSNTDLGTHK HRIPDFKLLA EAMGCAGLRA ESREEVDAVI KQALEINDRP VVIDFTVGKD AQVWPMVAAG TGNSEIMAAR GIRPLFEEDD V
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