| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6013 |
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| Symbol | |
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| ID | 8330223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7058458 |
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| End bp | 7060071 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644946446 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_003103666 |
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| Protein GI | 256380006 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.446591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCACGC TCGGCGATAG CTTCCACGTC TACGACACCA CCCTCCGGGA CGGCGCACAG
CGCGAGGGCA TCACCTACTC CGTCACCGAC AAGCTCCAGG TGGCGCGCCT GCTGGACGGG
CTGGGCGTCG GCTTCATCGA GGGCGGCTGG CCGGGCGCGA TGCCCAAGGA CACCGAGTTC
TTCGCCCGCG CGGCCTCCGG AGAGCTGGAG CTGTCCAGCG CGAAGCTGGT CGCGTTCGGC
GCCACCCGCA AGGCGGGCGT GAAGGTCCAG GACGACCCGC AGGTGCGCGC CCTGCTCGAC
TCGCAGGCCC CCGTCGTCAC CCTGGTGGCC AAGTCGGACC TGCGGCACGT GGAGCGCGCC
CTGCGCACCG ACGCCACCGA GAACCTCGCC ATGGTCCACG ACACCGTCAA GCACCTGGTG
GACAACGGCC GCCGGGTGTT CCTGGACGCC GAGCACTTCT TCGACGGCTT CGCGCACGAC
CCGGACACCG CGCTGCGCGT GCTGGAGGCG GGCGTCACCG GCGGGGCCGA CGTGGTGGTG
CTGTGCGACA CCAACGGCGG CCAGCTGCCG CTCGGCCTGG CCGAGGTGGT CGCGGACGTC
ATCGCCCGCA CCGGCTTCCG GGTCGGCATC CACTGCCAGG ACGACACGTC CTGCGCCGTG
GCGAACACCC TCGCGGCCGT GCAGGCGGGC GCGACGCACG TCCAGTGCAC CGCGAACGGG
TACGGCGAGC GGGCGGGCAA CGCCGACCTG TTCGCCGTGG TCGGCAACCT GGTCACCAAG
CTGGGGATGC CGGTCCTGCC GGAGGGGGCC GTGGGGGAGC TCACCCGCGT CTCGCACGCC
CTCGCCGAGA TCGCCAACAT CGCACCCGAC ACCCACCAGG CCTACGTCGG GTCGTCGGCC
TTCGCCCACA AGGCGGGCCT GCACGCGAGC GCGATCAAGG TCGACCCCCT GCTGTACAAC
CACATCGACC CGGAGGTGGT CGGCAACGGC ATGAAGATCC TGGTCACCGA GATGGCCGGG
CGGGCGAGCC TGGAGCTGAA GGGGCGGGAG CTGGGCGTGG ACCTCGCGGC CAACCCCGAG
GCCCTGACCA GCGCCGTCCG CAAGGTCAAG GAGCTGGAGG CGGGCGGCTG GTCGTTCGAG
GCGGCCGACG CGTCGCTGGA GCTGCTGCTG CGCGACGAGC TGTCCGAACT GGACGCCCCG
CCGTTCACCC TGGAGTCCTA CCGCGTCGTG CTCGACCACC GCTCGGACGG GGAGATCGGG
TCCGAGGCGA CGGTGAAGGT GCACGTGGGC GGCGAGCGGG TGATCGCCAC GGCGGAGGGC
AACGGCCCGG TGCACGCGCT GGACGGGGCC CTGCGCAAGG CGCTGCTGCC GCACCTGTCC
TGGTTGGACG CGGTGAAGCT CAACGACTAC AAGGTCCGCA TCCTGTCCGG TGACGGGCGG
GACGCGGACG GCGCAGGCGG CACCGAGGCG GTGACGCGGG TGCTGGTGAA CTCGACCGAC
GGCGAGCGCG AGTGGACCAC GGTCGGGGTG CACGGCAACA TCGTCGAGGC GAGCTGGCTG
GCGCTGTGCG ACGCGCTGGC GCACAAGGCC GTGCACGCGT CCGCGCTGGT CTGA
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| Protein sequence | MTTLGDSFHV YDTTLRDGAQ REGITYSVTD KLQVARLLDG LGVGFIEGGW PGAMPKDTEF
FARAASGELE LSSAKLVAFG ATRKAGVKVQ DDPQVRALLD SQAPVVTLVA KSDLRHVERA
LRTDATENLA MVHDTVKHLV DNGRRVFLDA EHFFDGFAHD PDTALRVLEA GVTGGADVVV
LCDTNGGQLP LGLAEVVADV IARTGFRVGI HCQDDTSCAV ANTLAAVQAG ATHVQCTANG
YGERAGNADL FAVVGNLVTK LGMPVLPEGA VGELTRVSHA LAEIANIAPD THQAYVGSSA
FAHKAGLHAS AIKVDPLLYN HIDPEVVGNG MKILVTEMAG RASLELKGRE LGVDLAANPE
ALTSAVRKVK ELEAGGWSFE AADASLELLL RDELSELDAP PFTLESYRVV LDHRSDGEIG
SEATVKVHVG GERVIATAEG NGPVHALDGA LRKALLPHLS WLDAVKLNDY KVRILSGDGR
DADGAGGTEA VTRVLVNSTD GEREWTTVGV HGNIVEASWL ALCDALAHKA VHASALV
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