Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6012 |
Symbol | |
ID | 8330222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 7057758 |
End bp | 7058411 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644946445 |
Product | hypothetical protein |
Protein accession | YP_003103665 |
Protein GI | 256380005 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACCCC TGCGCGGACC ACGCCTCCGC TCCCCCGCCC GATTAGCCCT GCTGACGGTC GTCGCGCTCC TGCTGACGGC GAGCCCGGCC GCTGCGGCGA CCACGCTGCA GATCGGCACG GTCGTCCGGC TGGCCTCGAA CGAGCAGTGC GTCAACGGCT TCACCGTCGA GGACCACCTG CTGCTGCCGC CGGACTGCGT GCCGAGGGCT GCCGGCGTCA GCCCGCTCGG CGTGGCGGTT CTGGGCGCGG GCGGCGAGAC GATCGCCCGG ATCACCGGGG TGAGCCGCGC CTTCGTCCTG GCCACGCAGG TTCCGGGCGC GACCGTCACC AGGGTGCCCG TGGTGCGGCA CACCGGGACC CGGATCACCG GCGCGACGGC GGCGGGGATC GGCAAGCGGG TGTGCGTGCT CAGCCAGGTC AACGGGACGG TGTGCGGGCC GGTGGTGGCG CTGAACCGGA CCGTGAACTG GGCCGAGGGG ACCGTGACCG GGCTGTCCGA GCTGCGGGTG TGCGCGAGCG GGCCGTGGAA CTGGGCCCCG GTGGTCGACG GGTCGCTCGC CGTGGGGCAC GTGCTCGGCG GCGCGGGGTG CTCGCTGTAC TTCCTGCCGA TCGCGCCGCT GCTCGCCGGG AGCGGGCTGC GGCTGGTGGT GTAG
|
Protein sequence | MEPLRGPRLR SPARLALLTV VALLLTASPA AAATTLQIGT VVRLASNEQC VNGFTVEDHL LLPPDCVPRA AGVSPLGVAV LGAGGETIAR ITGVSRAFVL ATQVPGATVT RVPVVRHTGT RITGATAAGI GKRVCVLSQV NGTVCGPVVA LNRTVNWAEG TVTGLSELRV CASGPWNWAP VVDGSLAVGH VLGGAGCSLY FLPIAPLLAG SGLRLVV
|
| |