| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6006 |
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| Symbol | |
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| ID | 8330213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7049998 |
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| End bp | 7051416 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644946436 |
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| Product | 3-isopropylmalate dehydratase, large subunit |
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| Protein accession | YP_003103659 |
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| Protein GI | 256379999 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0519027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCA CGCTCGCGGA GAAGGTGTGG GAGGCGCACG TCGTGCGCCA CGGCAGCGGC
GCTGAGCCCG ACCTGCTCTA CATCGACCTC CACCTGCTGC ACGAGGTGAC CAGTCCGCAG
GCGTTCGACG GGCTTCGGCT GGCCGGTCGG CGGCTGCGCA GGCCCGACCT CACGATCGCC
ACCGAGGACC ACAACGTGCC CACGGTGGAC ATCGAGCTGC CGATCGCCGA CCCGGTGTCG
CGCACGCAGG TGGAGACGTT GCGGCGCAAC TGCGCGGAGT TCGGGGTGCG GCTGCACCCC
ATGGGCGACG CGGAGCAGGG GATCGTGCAC GTGGTGGGAC CGCAGCTCGG GCTGACCCAG
CCGGGCATGA CGGTCGTGTG CGGCGACAGC CACACGTCCA CGCACGGCGC GTTCGGCGCG
CTCGCGTTCG GCATCGGCAC GTCCGAGGTC GAGCACGTGA TGGCGACGCA GACGCTTCCC
CTGCGCCCCT TCAAGACCAT GGCGATCAAC GTCGAGGGCT CGCTGCGGCC CGGCGTCACG
GCCAAGGACG TCATCCTCGC CGTCATCGCG AAGATCGGCA CCGGCGGCGG CCAGGGGTAC
GTGCTGGAGT ACCGGGGATC GGCGATCTCC GCGCTGTCCA TGGAAGCCCG CATGACGGTC
TGCAACATGT CGATCGAGGC GGGCGCGCGC GCCGGGATGA TCGCGCCGGA CCAGACCACG
TTCGACTACA TCAAGGGCCG CCCGCACGCG CCGTCCGGCG CCGACTGGGA CGCCGCCGTC
GAGTACTGGT CGACGCTCGC CACCGACGAG GGCGCGGAGT TCGACGCCGA GGTGACCCTC
GACGCGGACG AGCTGACGCC GTTCGTCACG TGGGGCACCA ACCCCGGCCA GGGCCTGCCG
CTCGGCGCGT CCGTGCCGGA CCCCGAGGCG ATCGCGGACG AGAACGAGCG CGTGGCCGCC
GAGAAGGCGC TGTCGTACAT GGGGCTGGAG GCGGGCACGC CGCTGCGCGA CATCCGCGTG
GACACGGTGT TCCTCGGCTC TTGCACGAAC GGACGAATCG AGGACCTGCG CGCGGCGGCG
GACGTGCTGC GCGGTCACCA TGTCGCGGAC GGCGTCCGGA TGCTGGTCGT GCCCGGCTCG
ATGCGCGTGC GCGCGCAGGC CGAGACCGAG GGGCTGCACG AGGTGTTCCA GGCCGCGGGC
GCGGAGTGGC GCCAGGCCGG GTGCTCGATG TGCCTGGGCA TGAACCCGGA CCAGCTCAAG
CCGGGCGAGC GCAGCGCGTC CACCTCCAAC CGCAACTTCG AGGGCAGGCA GGGCAAGGGC
GGTCGCACGC ACCTGGTGTC GCCGCTCGTC GCCGCCGCCA CGGCCGTGCG CGGCACCCTG
TCGTCCCCGG CCGACCTGAC CCCCGCCGAC CTGGTCTGA
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| Protein sequence | MSRTLAEKVW EAHVVRHGSG AEPDLLYIDL HLLHEVTSPQ AFDGLRLAGR RLRRPDLTIA
TEDHNVPTVD IELPIADPVS RTQVETLRRN CAEFGVRLHP MGDAEQGIVH VVGPQLGLTQ
PGMTVVCGDS HTSTHGAFGA LAFGIGTSEV EHVMATQTLP LRPFKTMAIN VEGSLRPGVT
AKDVILAVIA KIGTGGGQGY VLEYRGSAIS ALSMEARMTV CNMSIEAGAR AGMIAPDQTT
FDYIKGRPHA PSGADWDAAV EYWSTLATDE GAEFDAEVTL DADELTPFVT WGTNPGQGLP
LGASVPDPEA IADENERVAA EKALSYMGLE AGTPLRDIRV DTVFLGSCTN GRIEDLRAAA
DVLRGHHVAD GVRMLVVPGS MRVRAQAETE GLHEVFQAAG AEWRQAGCSM CLGMNPDQLK
PGERSASTSN RNFEGRQGKG GRTHLVSPLV AAATAVRGTL SSPADLTPAD LV
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