| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5930 |
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| Symbol | |
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| ID | 8330137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6972022 |
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| End bp | 6973578 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644946361 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_003103584 |
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| Protein GI | 256379924 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.411186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCAACA CCCTTTCCGA CCGGCTCACC TCGGTCCTGC AGAACCTGCG GGGCAAGGGG
CGGCTCTCCG ACGCCGACAT CGACGCCACC GCGCGGGAGA TCCGGGTGGC GCTGCTGGAG
GCCGACGTCG CGCTGCCCGT CGTGCGCGCC TTCATCGCGA AGGTGAAGGA GCGCGCCAAG
GGCGCGGAGG TCTCCCAGGC GCTGAACCCG GCCCAGCAGG TCATCAAGAT CGTCAACGAG
GAGCTCGTCG CGATCCTCGG CGGCGAGACC CGCCGGATCA ACCTGGCGAA GAACCCGCCC
TCGGTGATCA TGCTCGCGGG CCTCCAGGGC GCGGGCAAGA CCACCCTGGC GGGCAAGCTC
GCCAAGTGGC TGCGCGGCCA GGGCCACACC CCGCTGCTGG TCGCCTGCGA CCTCCAGCGC
CCCAACGCGG TCACCCAGCT CCAGGTCGTC GGCGAGCGCG CGGGCGTCTC GGTGTTCGCC
CCCGAGCCGG GCAACGGCGT GGGCGACCCC GTCGACGTCG CCAAGCGCGG CGTCGAGGAG
GCCAAGCGGG CGCAGCACGA CATCGTCGTC GTCGACACCG CCGGTCGCCT CGGCGTCGAC
GAGGAGATGA TGCGGCAGGC CGCGGACATC CGCGCCGCCG TGAACCCCGA CGAGGTCCTG
TTCGTCGTCG ACGCCATGAT CGGCCAGGAC GCGGTCAACA CCGCGACCGC CTTCAGCGAG
GGCGTCGGCT TCACCGGCGT CGTGCTCACC AAGCTCGACG GCGACGCCAG GGGCGGCGCG
GCGCTCAGCG TCCGCGAGGT CACCGGCCAG CCGATCCTGT TCGCCTCCAA CGGGGAGAAG
CTGGAGGACT TCGACGTCTT CCACCCCGAC CGGATGGCCA GCCGCATCCT CGGCATGGGC
GACGTGCTGA CCCTCATCGA GCACGCCGAG CAGGCCTTCG ACGCCGAGCG CGCCGAAGCC
GCCGCGGTGA AGATGGGGTC CGGCCAGCTC ACGCTGGAGG ACTTCCTGGA GCAGATGCTC
GCGATCCGCA AGATGGGCCC CATCGCGAAC CTGCTGGGGA TGCTGCCCGG CGCGGGTCAG
ATGAAGGACC AGCTCGCGAT GCTGGACGAG AAGCACCTCG ACCGCGTGCA GGCGATCATC
CGGGGCATGA CCCCCGCCGA GCGGGACGAC CCGAAGATCA TCAACGCCTC GCGGCGGCTG
CGCATCGCCA ACGGCTCCGG CGTGCGGGTC AGCGACGTCA ACGACCTCGT GACCCGGTTC
TTCGACGCCC GCAAGATGAT GTCGCAGATG GCGGGCCGGT TCGGCCTGCC CGGCGCGGGC
GGCAAGAACA ACCGCAAGAA CGCCAAGGGC AAGAAGGGCA AGAAGGGCAA GGGCGGGCGC
GGCCCGACGC CGCCGAAGGC GCGCGGCGGC TTCCCCGGGA TGCCCGGCAT GTTCCCCGGC
GGGATGCCCG GCGGGATGCC GGGGATGCCC CCCGGTCAGC TCCCGCCCGG CCTCGGCGGC
GGCATGAACG AGCTGCCCCC CGGCGTCGAC CCGACCAAGC TGAAGTTCGG CAAGTGA
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| Protein sequence | MFNTLSDRLT SVLQNLRGKG RLSDADIDAT AREIRVALLE ADVALPVVRA FIAKVKERAK
GAEVSQALNP AQQVIKIVNE ELVAILGGET RRINLAKNPP SVIMLAGLQG AGKTTLAGKL
AKWLRGQGHT PLLVACDLQR PNAVTQLQVV GERAGVSVFA PEPGNGVGDP VDVAKRGVEE
AKRAQHDIVV VDTAGRLGVD EEMMRQAADI RAAVNPDEVL FVVDAMIGQD AVNTATAFSE
GVGFTGVVLT KLDGDARGGA ALSVREVTGQ PILFASNGEK LEDFDVFHPD RMASRILGMG
DVLTLIEHAE QAFDAERAEA AAVKMGSGQL TLEDFLEQML AIRKMGPIAN LLGMLPGAGQ
MKDQLAMLDE KHLDRVQAII RGMTPAERDD PKIINASRRL RIANGSGVRV SDVNDLVTRF
FDARKMMSQM AGRFGLPGAG GKNNRKNAKG KKGKKGKGGR GPTPPKARGG FPGMPGMFPG
GMPGGMPGMP PGQLPPGLGG GMNELPPGVD PTKLKFGK
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