Gene Amir_5866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5866 
Symbol 
ID8330073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6906696 
End bp6907445 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content79% 
IMG OID644946298 
Productpeptidase S1 and S6 chymotrypsin/Hap 
Protein accessionYP_003103521 
Protein GI256379861 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5640] Secreted trypsin-like serine protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCA GCCCCCGCTT AGTCGCCGCC CTCGCCCTGG TCGCGGTCCA GCTCGCCTCC 
CAGCTCGTCG CCGCACCCGC CGCGCTCGCC GTCGTCGGGG GCTCCGTCGC CGGTCGCGCG
CCGTGGGTGG CCGCCCTGCT CGACGCGCGC GGCTCCCAGT TCTGCGGCGG CGCCCTCATC
GCCCCCGACC GGGTCGTGAC CGCCGCCCAC TGCACCCAGG AGCGCGGCCT GCTCGGACCG
CGCGACCGCG CGCCCCGGCA GCTCACCGTC GTGCTCGACC GGCACGACCT GCGCACGAGA
AGCGGGGTGC GGGTCGGCGT CTCCGGGATC TGGCGGCACC CGGCGTTCAC CGACGTGGGA
CGCGGCGACG ACCTGGCCGT GCTCCAGCTC GACGGCCCGG TCGCGTTCGA GCCCGTCCGG
GTCGGCGACG CCGTCGCGGG CCGCACCGCC ACCGCCTACG GCTGGGGCCG CACCGCCGAG
AGCGGCCCGG TGTCCTCGCT GCTGCGCCAG GTCGACGTGC CGATCCGCGC GGACCACGAC
TGCGCCGCCG CGCTCGCCGG CTACCGCGCC GACGCGATGC TGTGCGCGGG CTTCCCGGAC
GGCGGCAGGG ACGCCTGCAC GGGCGACTCC GGCGGCCCGC TGGTCTCCGA CGGCCTGCTC
GTCGGCGTCG TCTCCTACGG CCGGGGCTGC GCCCGCGCGG GCCAGCCCGG CGCCTACACC
CGGCTCGCCC ACTACCGCGA CCGGCTCTGA
 
Protein sequence
MRISPRLVAA LALVAVQLAS QLVAAPAALA VVGGSVAGRA PWVAALLDAR GSQFCGGALI 
APDRVVTAAH CTQERGLLGP RDRAPRQLTV VLDRHDLRTR SGVRVGVSGI WRHPAFTDVG
RGDDLAVLQL DGPVAFEPVR VGDAVAGRTA TAYGWGRTAE SGPVSSLLRQ VDVPIRADHD
CAAALAGYRA DAMLCAGFPD GGRDACTGDS GGPLVSDGLL VGVVSYGRGC ARAGQPGAYT
RLAHYRDRL