Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5851 |
Symbol | |
ID | 8330058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6887701 |
End bp | 6888429 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644946284 |
Product | transcriptional regulator, Crp/Fnr family |
Protein accession | YP_003103507 |
Protein GI | 256379847 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0930905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCTGA TGTCATGGTC ACCGAGCACG ACCCAGCCGG AGCAACCGGT GTGGCCGCAC GACAGCCTGC TGTCGCGGCT GCGCGACCAG GCGCGCGACG AGCTGCTGGC GATGGGCACG GTGGTGCGGT ACGCGCCGAA CCGGGACGTG ATCGTGCAGG ACGCCCGCGA CACGCACGCG CTGCTGCTGC TCGACGGCGT GGTGAAGGTG CAGACCACGG ACGAGACCGG CGACACCGCG CTGCTGGCGA TCAAGGCGGC CGGTGACTTC GTCGGCGAGA TGGCGGCGCT GGACCGCAAG CCGAGGTCGG CGAGCGTGAT CACGTGCGGC GAGGTGACCG CGCGGATGAT CAGCAGCAGC GAGCTGATGG GCTTCCTGCA CCGCCGCAAC GAGGTCTTCG TCGAGATGAT CGGCATGGTG AACGAGCGGC TGCGGTGGGC GATCGAGCGC AGGCGGGACT TCCTCGCGCG GGCGGCCGAC GAGCGGTTGG CGAAGGTGCT CGCGGAGCTG GTGCGCACGC ACGGCCGCGA GGAGCCCGGC GGGTGGACGC TCGGGTTCCC GCTGACCAAG GTGGAGCTGG CGTCGATCGC GGGCATGAAG CCGCGCACGG CGGAGAAGGC GTTCAGCGAC CTGCGCAAGG CCGGGGTCGT GGTGAGCCAC CTGCGCCGGG ACGTGCTGGT GCCCGACCTG GACGCGCTGC GCGCCTACGC CCAGCGCCCG CCGCGCTGA
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Protein sequence | MVLMSWSPST TQPEQPVWPH DSLLSRLRDQ ARDELLAMGT VVRYAPNRDV IVQDARDTHA LLLLDGVVKV QTTDETGDTA LLAIKAAGDF VGEMAALDRK PRSASVITCG EVTARMISSS ELMGFLHRRN EVFVEMIGMV NERLRWAIER RRDFLARAAD ERLAKVLAEL VRTHGREEPG GWTLGFPLTK VELASIAGMK PRTAEKAFSD LRKAGVVVSH LRRDVLVPDL DALRAYAQRP PR
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