Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5745 |
Symbol | |
ID | 8329952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6773314 |
End bp | 6774567 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644946182 |
Product | drug resistance transporter, Bcr/CflA subfamily |
Protein accession | YP_003103405 |
Protein GI | 256379745 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGGTCA CCGCTGTGCA AGGACGTGGG AAGCTCGTCG CCCTGCTGGG CGTGCTGTGC TGCCTCGGCC CGCTGTCCAT CGACGCCTAC CTGCCCGCCT TCCCCGACAT GGCGAAGGAG TTCGGGGCGG GCGAGTCGCA GATCCAGCTG TCGCTGACGA CGTTCATCAT CGGCCTGTCC GTCGGCCAGC TGCTGATCGG CCCGCTGTCC GACTCGATCG GCAGGCGCAA GCCGCTGCTG TTCGGGATCG GCTCGTACGT GGTGCTGTCG CTGGTGTGCG CGATGGCGCC GAGCGCGGTC GCGCTGGCCG CGTTCCGGCT GCTCCAGGGC CTCGGCGTCG CCGCGGGCTT CGTGGTGGCC ATGGCCGTGG CCCGCGACCG GTTCTCCGGG CTGGCGATGG CGAAGTTCAT GTCGCTGATC ATGCTGGTCA ACGGCCTCGG CCCGATGCTC GCGCCGGTGC TGGGCGGGCA GGTGCTGCGC TACGCGTCGT GGCGCGCGAC GTTCGTCGTG CTCGCGGTCA TCGCGGTGGT GCTGCTGGTG CTGATGGCCG TCGGCCTGAA GGAGACCCTG CCGCCGGAGA AGCGCCGCCC GCTGGACCTC GGCGGCACGC TGCGCGTGTT CGGCGGCCTG CTGACCGACC GGGTGTTCGT CGGCTACGTG CTGGCGTCGG CGTTCGCGCT GGGCGCGATC TTCGGCTACG TGTCCGGCTC GTCGTTCGTG CTGCAGGGCG TGTTCGGCCT GTCCCCGCAG GAGTTCAGCC TGGTGTTCGC GCTGAACTCG GCGGGCATCT TCGTCGCGGG CGTGATCAAC ACGGCCCTGA CCGGCCGGAT CATGCCCAGG GGCCTGCTGC GGATCGGCCT GAGCACGGCG GTGCTGGCGG GCGTGGCGCT GGTCGTGGCG GGCGCGCTGG GCGGTGGCCT GGTGGCGTTC CTGGTGCCGC TGTTCCTGGT CACGTGCAGC ATCGGCCTGC TGATGCCGAA CGCGGCGACC CTGGCGATGG CCAGGCACCC GGAGGCGGCG GGCAGCTCGT CGGCGCTGCT GGGCGTGTCG CAGTTCCTGA TGGGCGGGCT GATGGCGCCG GTCGTGGGCG CGGGCGGTTC GACGAGCGTG CTGCCGCTGG CGCTGGTCAT GGCGGCCTGC ACGGCGCTGG CGCTGACCTC GTTCCTGGTG CTGACCAGGG GCGACAAGGG CATCACGAAG GACGAGCCCG AGGTCGTCGA GGCCGAGCAG ACCCCGGCCG CTTCGGCGGT CTAG
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Protein sequence | MGVTAVQGRG KLVALLGVLC CLGPLSIDAY LPAFPDMAKE FGAGESQIQL SLTTFIIGLS VGQLLIGPLS DSIGRRKPLL FGIGSYVVLS LVCAMAPSAV ALAAFRLLQG LGVAAGFVVA MAVARDRFSG LAMAKFMSLI MLVNGLGPML APVLGGQVLR YASWRATFVV LAVIAVVLLV LMAVGLKETL PPEKRRPLDL GGTLRVFGGL LTDRVFVGYV LASAFALGAI FGYVSGSSFV LQGVFGLSPQ EFSLVFALNS AGIFVAGVIN TALTGRIMPR GLLRIGLSTA VLAGVALVVA GALGGGLVAF LVPLFLVTCS IGLLMPNAAT LAMARHPEAA GSSSALLGVS QFLMGGLMAP VVGAGGSTSV LPLALVMAAC TALALTSFLV LTRGDKGITK DEPEVVEAEQ TPAASAV
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