| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5677 |
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| Symbol | |
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| ID | 8329884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6695531 |
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| End bp | 6698428 |
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| Gene Length | 2898 bp |
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| Protein Length | 965 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644946115 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003103338 |
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| Protein GI | 256379678 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGCAGG ACGACGGGAA CGCCCTCGGG GCGGCGCGCG CCGGTGGCGC GGGGGCGGCC
GACCCGGTCC CCCTCCGCTT CGAGGTGCTC GGGCTGCTGC GCGCCGTGCG CGGCTCCAGG
GAGGTCGACC TCGGGGCGGC CAAGCAGCGG GCGGTGCTCG CCGTGCTCCT GCTGGCCCGC
AACGCCCCGG TCAGCCGCGA CCAGATCATC GAGGCGGTCT GGGGGGAGAA CCCGCCGACC
TCCTCGGTCA ACCTCGTGCA GACCTACGTC GCGGGCCTGC GCCGCGCGCT CGAACCGCAC
CGGGCCAGGC GGGCGCCCGC CGAGCTGCTC ACCTCCGTCG GCGACGGCTA CCTGCTGCGC
GTGCCCACCT CCTCCGTCGA CCTCGACGCC TTCGAGCGCG CCACCACCTC GGCGGCCCGC
AGCAGGGCCC AGGGTGACCT GGAGGGGGCC GCCTCGGAGC TGGAATCCGC GCTGTCGCTG
TGGAGGGCCG AACCCCTCGG CGGGGTCACG GGGCTGTTCG CCGAGGTCGA GCGGCAGCGC
CTCGGCGAGC GCAGGCTGGC CGCGCTGGAG GAGCGCGCCG AGGTGCTGCT GCTGCTCGGC
CGCGGCGCCG AGCTGGTGCC GCAGCTGACC GCGCTGGTCG GCGAGCACCC GCTGCGCGAG
CGCGGCCACG GGCTGCTGAT GCGGGCGCTG TGCCAGGCGG GCAGGCAGGC CGAGTCGCTC
GCCGCCTACC GGGACGCCCG GCGCGCCCTC ATCGACGAGC TGGGCGTCGA GCCGGGGCCG
GAGCTGCGCA GGCTCCAGCA GGCGATCCTC GCCGGGGACG ACCCCGAACC GGCCGGGACC
CGCAAGCCCG CCGCCGTGCC CGCCCCGGAG CCCCGGCCCC CGGCCACCCC GGCGCAGCTG
CCCCGCGCGC CCGCCGCCCT CGCGGGCCGG GCCGCCGCGC TGGCGCGGAT GGACGAGCTG
CTGCGCGCCC AGCGCGACAG CGGCGTCGTC CTCGTCGTCA CGGGCCCCGC GGGCGTCGGC
AAGACCGCGC TCGCGCTGCA CTGGGCGCAC CGCGTGCGGG ACGAGTTCCC CGACGGGCAG
CTCTACGCCG ACCTGCACGG GTACGACCCG AACCAGGAGC CGCTCGGCGC GGGCGAGGTG
CTCAACCGCT TCCTGCGCAC CCTGGGCGTG CCCGCCGAGG ACGTCCCGGT GGGCGTCGAC
GAGCGCTCCG CCCTGTTCCG CACGCTCGTC GCCGACCGGC GGATGGTGGT GCTGCTCGAC
AACGCGCGCG GCTCCACCGA GCTGATGGCG CTGCTCACCG GCGCCCCGTC GTGCGTCCTG
GTCACCAGCA GGCGCAGGCT CGTCGGGCTC GTCGCGCACG CCGAGGCGCA CCTGGTCGAG
CTGGACGTGC TCGACCAGGA CTCGGCGCTG GAGCTGCTCG GGCGGCGCGA CCCCGGCGAG
ATGGGCGCGC TGCGCAGGCT GGCCGTGCTG TGCGACGGGC TGCCGCTGGC GCTGCGCATC
GCGGCGGCCC GGCTGGCCGC GCCGTCGCTG CGCGCCGCCG AGCTGGTGGC CGAGCTGGAC
GACGAGCACG GCAGGCTCGC CGCGCTCGGG CTGGAGGACG AGGACTCCAC GGTCCGGGCC
GCGCTGGACG CCTCGCGCCG CGCCCTGCCG CCCCGGCCCG CGCACCTGCT CGCGCTGCTC
GGGCTGCACC CCGGCGCGGA CCTCACCCCG CACGCCGCCG CCGCGCTCGC CCGGTTGCCG
CTGGCCGCCG CGCAGCGCGA GCTGGACGTG CTGACCTCGG CGAACCTGCT CACGGTCAAC
GAGCCGGGGC GGTACGGCGC GCACGACCTG GTCCGGGTCT ACACCCGCGC GCTCGCCGCC
GAGCTGCCCG AGGACCAGCG CCGCGCGGCC ACCGGCCGGG TGCTGGACTA CTACCTGCAC
TGCGCCGACC TGGCCGACGC GCTGATGCCG GTGGGCCGGG GCGCGGTGCG GGTCGCGCCC
GAGCACGTGC CGGTCGACGT GCCCGTGCTC AGCGGCGTCG TGGACGCCAC CGCCTGGCTG
GAGGCGGAGC AGGCGAACAT CATCGCCGCC GCCGAGCACG CGGGCGACTC CGGCGAGCGG
CGCTGGCTGG CGCACGCCTG GCAGCTGCCC TACACGCTGT CGCGGTTCTT CTGGCTGCGC
GCCGACCGGC ACACCTGGCT CAGCACCACC GAGCGCGCGC TGGGCGCGGC CACCGAGCTG
GGCGACCCCG AGGCTCGGTT CGTGACGCTG TTCAACCTCG GGGTGGCGCT GGCGCAGTTC
CACCGCTCCG AGGAGGCGCT GGCCAGGCAC CAGGAGGCGC TGGAGGTCGC CCGCTCCTGG
GGCGACGTGT CGGCGCAGGC CAGGGCACTC ACGACGGTCG CCGACACGCT CCAGCTCCTG
GGCCGGGTCG ACGAGTCCGA GTCCTGCTAC CGGGAGGCGC TGGAGGTCAG CCGGGCGGCC
GGGTCCCGGT GGGCCGAGGC CAACGCGCAC CACAACCTGG GGCTGCTGTA CTCGGTGAGC
AGGCGCTACC CGGACGCCCT CCCCTGGCTC GACGCGGCCA TCCGGATGTA CCGGGAGGTG
GGGGAGCAGT GCGGCGAGTC CTCCTGCCAC GCGGACCTGT CCACGGTGCT GCTGGAGTCG
GGCGAGCACA CCTCGGCCGC CGCGTCCGCG CGGACCGCGC TGTCGCTGGC CACCGAGGTG
GCCAGCGACT ACCACCAGGC GCTCGCGCAC GACCGGCTGG CCAGGGTCTT CGAGCGGCAG
GGCGTCGGCG GGGCGGTGGC GCACTGGCAG CGGGCGCTGG CGCTGTTCAC CGAGCTGGGC
GCGCCCGAGG CCGACGAGGT CCGGGGCCGG TTGGCGCGCA CCCGCGCCGA GCGGTCGGTC
GGGGCGACCA ACGCCTGA
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| Protein sequence | MEQDDGNALG AARAGGAGAA DPVPLRFEVL GLLRAVRGSR EVDLGAAKQR AVLAVLLLAR
NAPVSRDQII EAVWGENPPT SSVNLVQTYV AGLRRALEPH RARRAPAELL TSVGDGYLLR
VPTSSVDLDA FERATTSAAR SRAQGDLEGA ASELESALSL WRAEPLGGVT GLFAEVERQR
LGERRLAALE ERAEVLLLLG RGAELVPQLT ALVGEHPLRE RGHGLLMRAL CQAGRQAESL
AAYRDARRAL IDELGVEPGP ELRRLQQAIL AGDDPEPAGT RKPAAVPAPE PRPPATPAQL
PRAPAALAGR AAALARMDEL LRAQRDSGVV LVVTGPAGVG KTALALHWAH RVRDEFPDGQ
LYADLHGYDP NQEPLGAGEV LNRFLRTLGV PAEDVPVGVD ERSALFRTLV ADRRMVVLLD
NARGSTELMA LLTGAPSCVL VTSRRRLVGL VAHAEAHLVE LDVLDQDSAL ELLGRRDPGE
MGALRRLAVL CDGLPLALRI AAARLAAPSL RAAELVAELD DEHGRLAALG LEDEDSTVRA
ALDASRRALP PRPAHLLALL GLHPGADLTP HAAAALARLP LAAAQRELDV LTSANLLTVN
EPGRYGAHDL VRVYTRALAA ELPEDQRRAA TGRVLDYYLH CADLADALMP VGRGAVRVAP
EHVPVDVPVL SGVVDATAWL EAEQANIIAA AEHAGDSGER RWLAHAWQLP YTLSRFFWLR
ADRHTWLSTT ERALGAATEL GDPEARFVTL FNLGVALAQF HRSEEALARH QEALEVARSW
GDVSAQARAL TTVADTLQLL GRVDESESCY REALEVSRAA GSRWAEANAH HNLGLLYSVS
RRYPDALPWL DAAIRMYREV GEQCGESSCH ADLSTVLLES GEHTSAAASA RTALSLATEV
ASDYHQALAH DRLARVFERQ GVGGAVAHWQ RALALFTELG APEADEVRGR LARTRAERSV
GATNA
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