Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5670 |
Symbol | |
ID | 8329877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6683863 |
End bp | 6684870 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644946108 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003103331 |
Protein GI | 256379671 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.661826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCACCA GGACCGTCGC CATCCACTAC GTCACCGCGG CCCTGCGCGG CGCGCGGCGC GCGGGCAGAC CCGTCGAACC GCTCCTCGAC GTCGCGGGCA TCGGCCCCGC CCTGCTCGCC GACACCCGCG CCCGCGTCAC CCCCGAGCAG TACACCCGCC TGATCCAGGC ACTCTGGGAC GACCTGGACG ACGAGTTCAT GGGCCTGGCC CCGCGCCGCA GCAAGCGCGG CACGTTCGCC ACCATGTGCC TGCTCGCCGT GCACTGCCCG TCCCTGGAGT CCGCGCTGCT CCGGGGAATG GCGTTCTACG ACCTGTTCGA CGTCGAGCCC GCGCCCGCCC TGCGCGCCGA CCCGACCGCC CCCACCGCCA GCCTCGAACT GGACACCGGG GCGCTCGACG ACCCCGACCG CTTCCTCGTC GAGTCGCTCC TGGTGCTGTG GCACCGCTTC TCGTCCTGGC TGATCGGCCG CCGCATCCCG CTGCGCTCGG TCCGGCTCGC CCACCCCGAA CCGCCGCACG CCGCCGAGTA CCACCTGATC TTCGGCTGCC CGCTGCGGTT CGACGCGGGC GTCACCGCGC TGGAGTTCGA CACCCGCTTC CTGCGGATGC CGGTCGCCCA GGACGAGGCC GCGCTGCGCC GGTTCCTGCG CAACTCGCCC GCCGAGCTGC TCTCCCGCCG CGACCACGGG GCCGCCACCT CCGGCCAGGT CCGCCGCGAG CTGGGCTCCG GCGCGCCCGG ACTGCCGGAG GTGGCCGCCA GGCTCGGGGT GAGCGCCGCG ACGCTGCGCC GCAGGCTCAC CGCCGAGGGC ACCACGTTCC GCGAGGTCCG CGAGCAGCTG CTGCGCGACC AGGCGGTGGC GAGCCTGGTG CGCGGCGGCG AGTCGGTGGA GGAGCTGGCG CTGCGCCTGG GCTTCTCGGA GGCCAGCGCC TTCCACCGGG CGTTCAAGCG CTGGACGGGC AGCAGCCCCG GCGCGTACCG CACCGGGGCC GCCCCGCGCT ACCGGTAG
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Protein sequence | MLTRTVAIHY VTAALRGARR AGRPVEPLLD VAGIGPALLA DTRARVTPEQ YTRLIQALWD DLDDEFMGLA PRRSKRGTFA TMCLLAVHCP SLESALLRGM AFYDLFDVEP APALRADPTA PTASLELDTG ALDDPDRFLV ESLLVLWHRF SSWLIGRRIP LRSVRLAHPE PPHAAEYHLI FGCPLRFDAG VTALEFDTRF LRMPVAQDEA ALRRFLRNSP AELLSRRDHG AATSGQVRRE LGSGAPGLPE VAARLGVSAA TLRRRLTAEG TTFREVREQL LRDQAVASLV RGGESVEELA LRLGFSEASA FHRAFKRWTG SSPGAYRTGA APRYR
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