Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5660 |
Symbol | gcvT |
ID | 8329867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6672763 |
End bp | 6673860 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644946098 |
Product | glycine cleavage system aminomethyltransferase T |
Protein accession | YP_003103321 |
Protein GI | 256379661 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
TIGRFAM ID | [TIGR00528] glycine cleavage system T protein [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACCCC GCCGCACCCC GCTGCACGCC GAGCACGAGG CCCTCGGCGC GCACTTCACC GACTTCGCGG GCTGGCGGAT GCCGCTGCGC TACGACAGCG AGCTCGCCGA GCACCACGCC GTGCGCTCCT CGGCGGGCCT GTTCGACCTG ACCCACATGG GCGAGATCGT CCTGTCCGGC CCCGAGGCGG GCGCCGCGCT CGACCACGCC CTGGTCGGCC ACTGCTCGGC CATCGGCGTC GGCCGCGCCC GCTACACGAT GATCTGCGCC GAGAGCGGCG GCGTCGTGGA CGACCTGATC GTCTACCGGC TCGCCGAGCA GGAGTACCTG GTCGTCGCGA ACGCCTCGAA CGCGACCACC GTCGCCGCCG AGCTCGTCGA GCGGGCGAAG GGCTTCGACA CCGAGGTCGT CGACCGCTCC GAGGACTACG CCCTGATCGC CGTGCAGGGC CCGGCCTCCA CCACCATCCT GGCCGGTCTG ACCAGCACCG ACCTGGCCTC GGTCAAGTAC TACGCCTCCT ACCCGGCCGA GGTCGCGGGC AAGCCCGTCC TGCTGGCCCG CACCGGGTAC ACCGGCGAGG ACGGCTTCGA GCTGTTCACC GCCCCCGCCG ACGCCGCCCA CGTCTGGCGG GCGCTGCTGG AGGCCGGTCA GCCGCACGAC CTCAAGCCCG CGGGCCTCGG CTGCCGCGAC ACGCTCCGCC TCGAGGCGGG GATGCCGCTG TACGGCAACG AGCTGGGCCT GGACCGCACC CCGTTCGAGG CGAACCTCGG CCGCGTCGTG AAGCTCGACA AGCCGGGCGA CTTCGTCGGC CGCGCCGCGC TCGCCGCCGC CGCCGAGGCG GGCGCCGACA GCACCCTCGT CGGTCTCAGG ACCGCCTCGC GCCGGGCGCC CCGCCACGGC TACCCCGTGC TCGACGCCGA CGGCGCCGAG ATCGGCGTGG TCACCAGCGG CGCCCTGTCG CCCACCCTCG GCCACTCGGT GGCGATGGCC TACGTGACCA GGGCCAACGC CGAGCCCGGC ACCGCGCTGA CCGTGGACGT CCGTGGCCGC CGCGAGCCCG TGGAGGTCGT CGCCCTGCCC TTCTACAAGC GAAAGTGA
|
Protein sequence | MEPRRTPLHA EHEALGAHFT DFAGWRMPLR YDSELAEHHA VRSSAGLFDL THMGEIVLSG PEAGAALDHA LVGHCSAIGV GRARYTMICA ESGGVVDDLI VYRLAEQEYL VVANASNATT VAAELVERAK GFDTEVVDRS EDYALIAVQG PASTTILAGL TSTDLASVKY YASYPAEVAG KPVLLARTGY TGEDGFELFT APADAAHVWR ALLEAGQPHD LKPAGLGCRD TLRLEAGMPL YGNELGLDRT PFEANLGRVV KLDKPGDFVG RAALAAAAEA GADSTLVGLR TASRRAPRHG YPVLDADGAE IGVVTSGALS PTLGHSVAMA YVTRANAEPG TALTVDVRGR REPVEVVALP FYKRK
|
| |