| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5635 |
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| Symbol | |
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| ID | 8329841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6646242 |
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| End bp | 6650357 |
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| Gene Length | 4116 bp |
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| Protein Length | 1371 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644946073 |
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| Product | phage tail tape measure protein, TP901 family |
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| Protein accession | YP_003103297 |
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| Protein GI | 256379637 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5280] Phage-related minor tail protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGGTG GCCGGATCGA CATCGAGGTC CGCGCGGACA CTTCCAAGGT CGCTGGCGAT
CTGGAACGAG GGCTGCGCGG TGCCGCCGGG GCTGCCAATC GGCTCAGCGC GGGGCTCGGG
CTGGCGGCGG GTACCGCTGG CATCGCCGCA GGTCTCAAGT CGATCATCGA GGTCGGCAAT
GAGTACGCCG GGAACCTCAA CGAGCTGATG GCGGTCACGC AGGCCACCGG CGCGGAGATG
GCGGCAGCTG GCAGGCTCGC GCAGGACCTC GGCAGCGACC TGACCCTCCC GGCCACCAGC
GCCGCCGATG CAGCCAGCGC CATGAAGGAG CTGGCCAAGG GCGGTCTCGA CCTCGACGAG
GCGATGACCG CCGCGCGCGG CACGCTCCAG CTCGCCGCCG CCGCGCAGGT CGACGCTGCC
CAAGCGGCCG AGATCCAGAG CGACGCCCTG AACCAGTTCG GCTTGTCGGC GGACCAGGCA
TCGCATGTCG CTGACGTGCT GGCGAACACC GCGAACGCCG CCAGTGGCGA GATCACCGAC
ATGGCCGGGG CCCTGAAGTA TGTCGGCCCG GTGGCCAAAG CGGTGGGCGC GGACATCGAC
CAGGTCGCCA CCGCGATCGG CCTGATCGCC ACCCAGGGCA TCCGGGGTGA GCAGGCTGGC
ACGTCGCTGC GCGGCATGAT CGCCAGCCTT GCGGCGCCCA GCAAGCCCGC CGCCAAGGCG
TTGGGCGAGC TCGGCGTCGA GGCGTTCGAC ACCGAGGGCA AGTTCGTCGG TCTCCGCACG
GTCACCGAGC AACTGGCTGC GGCCAAGGCC CGGATGACCG AAGCGACGTT CGCCTTGAAC
GCGGCGACCG CGTTCGGCAA CGAGGGTATG ACCGTCGCGA GCGCGTTGGC GTCCACTGGC
GCGCAGGCGT TCGACGAGAT GGCAGAGGCG GTCGGTCGGG AAGGTGGCGC GGCCGACGTC
GCCGCTGCGA AGACCGAGGG TCTCGGCGGG GCGATCGACG GGCTGCAGTC GCAGCTCGAG
TCGGCGGGGA TCGGGATCTA CGAGGCGATC GACGAGCCGC TGGAAGCGGT GGTCCGGTCG
CTGGCGGAGG CGATCGACGA AGTCGGGCCG CAGATCGCGC GCGGCCTGGA GACCGCTGTC
GCAGCCGGGC GGCTGTACGG ACCGGGGCTG GCGGCGGCCA TCCGCGAGCG CGGTCAGGTC
GTGGTCCAGG CGGCACGCGA TGTACTGATG CCGATCGCAC GGGGCTCGGT CGGCCCGGTC
AACACCGCGA TCAACGCGGG CATCAAGCTG TTCGCCGACT TCACCGCCGG GCTGCGCCAC
GTGGTGGATG CCGCCCGGCC GGTGGCACAC GGGATCGGGG AGATCGCCTC CGCCTCCGCT
GATGGCGATG GGCCGGTGTC CGCGCTCGCG ACCGCCATCG GACTGCTCGG CGACGGCGTT
GTGGCCGTCA CCAGCCTGCT CGGGCCTGCG GGCGAGGGAG TCGGCGGGCT GCTCTCCGGG
GTGGCGTCCC TGCCAGGGCC GGTGCTGACT GCCGTCGCGA GTCTCGTCGC GTACCGGGTG
GCCGTGGGGG CGCTCCAGCG GTCTGAGGTC GGTGGCGGGC TGCGCCAGTT CGTCGGCGAG
ATACAGGCGC AGCGTCAGCA GGCACGAGAG AGCGGCGAGC AGATCGGGCT TCTCAGCTCG
ACTGTGGCCG CCTACCAGGC GTCGCAGCTG CCTGCGATCG CGACCACAAG GCGCTTCACC
GATGCGGTGG GCGAACTGCG CGGGACTGCC GCCTCGGCAG GGCGCCCGAT CGGTGTCCTG
TCCGCCTCCG TGGGGGCGCT GGCAGAACGC TCCCCGGCCG TCGCCGCTAT GCGCTCTACC
TACCGGTCAA CGTTCGACTC GATCTCCCAG TCCAGCGAGC GCGCCGGACT GGCCGTGGGC
ATCGCCAGCG AGTCGCTCAT CCGGGGTGTC CAGTCGCTCC CCAGCCGCGT CTCAGCGGCT
GTTCAGGCTG TCCCCACCGC AGTCGGGGTT GCCGCGATCG CCACGGCCGA CCGAGCCCGG
CAGGTCATCT CAGCCGTGCA GGCCATCCCG ACCGGGATCG GACTTGCAGC GGTCAGCATG
GCCGACCGGG CGCGCTCAGT GGTCTCGGCG GTCCAGGCGA TCCCCACCGG TGTCGGGCTC
GCCGCCGTTG CGACGGCTGA CCGGGCCCGA CAGATCGTGT CAGCCATCCA GGCCATCCCC
ACGGGGATCG GCGTGGCGGC GGTCAACATC GCGGACCGTG CCCGCTCGAT CGGCTCCTCC
ATCGCCTCCG GGCTGGACCG GGTCCCGGAC CTGGCGCAGC GCACCGTCAC CGCCCTCGGG
ACCCTGGGCG CGGCGGCGGG CGCGGCGACG ACCGCGCTCG GACGCGGCCT GCTCTCCGCC
GCGAACGATC TCGTCGGCGC ACTCGGCGGG CCGGCCGGTC TGGCGATCGC CGCAGCCTCG
GTCGGGCTGT CGATTTTGGC TGGGCGACAG CAGGACGCTG CCCAGCGGGC AGCCCAGCAC
GAGGCGGCAA CGCGCTCGCT CGCCGAGGCG CTGCGGGACA GCAACTACGC CATTACCGAA
AACATTAGGC TCCAGGCCGC CAAAACTTTG CAGGACCGGG GCGCGTCGGA CCTGGCCAAG
GAACTGCAAA TCCCCCTGTC CACGCTGACC GACGCCTACC TGGGCAACTC GGATGCACTT
TCCCAGGTCA ACGGGGTGTT GGACACCTAC CTCGCACAGG TGGAAGGACA GGGACAGCTA
GAGGGTCAGG TCGCCGGGCA AAATCCGCTG GCCGATAAGG CTTTCGAACT CCGCAAGATC
CTCGGCGAAC TGATCCCCGA ACTGGGCAAC AATGTCTCCA AGCAAAAGGA TCTGGACGAG
GCGCTCAAGA ACGGTCGCGC TTCCATGTCG GAAGCCACCG AAACCGGCCG CTCCCTCGCT
TCAGCACTCG GCGTTCTTTC GAGCAACGCG TCGAGCGCTA ACGACCGGGC CCGCGCCCTG
CGTACAGCCC TGGACGCGCT GGCCGGGGGG CAGGTCGACT TCCAGGCGGC GCAGGCGCGC
GTCTACGAGA CCCTGAGCCG GATCAGTGAG GCGTTCGGGC AGAACATCGA CAAGACCCAA
GGCTGGGGTC AATCGCTCCT CAACGTCGAT GGCAGCCTGA ACATCACCAC CAAAAACGGG
CGCACGCTTC GCGAGATGCT GTCCGACCTG ACCGGCCAGT CCGCCGACCT CGCATCAGCG
GCGTACGACC TGTCCATCAG CCAAGGAGAG GGTGTCAGCA CCGCCCTCGA CAAGGCGACA
GCAGCCGCCC AAAAAGCGTT GGACGGCTTC CTCGACCTGG CGGATGAATT CGGAATTACG
CGCGAGCAGG CCCTCATCCT CGCCGAGAGC ATGGGCCTGA TCCCGCGCAA TGTGGCCGTC
GCCCTGAGCA CGCCAGGCGA CGAGAAGACC AAGCAGGAGT TGCTGCTGGT CAAATCGATG
GCGGATCAAC TCCCGCCCGA CAAGCCAATC ACTGTCCGCA CGCTTTCCGA AGAGGCGAAG
AAGAAGCTCG AGGAGCTGGG CTACAAGGTT CAGACCACCC CGAACGGTGT GACCATCACG
GCCAGTACCA AGTCTGCCGA GGAAAAGCTC AACGAGTTCC TCAACAAGCC GTCGACCAAG
ACAGTGACCG TCATCTACAC CGGCGGGAAA CCAGCCCCCA ATGGGCCCAT GGGGGTGAAC
CACGACGGAA ACATCATCAA ACGGTTCGCC GAAGGCGGTC TCCACAAGCT CATGCCGATG
TCGGCGGGCA TCGCCCAGAT AGTGCCGCCG AACACATGGC GCGTCGTGGG CGACCGCCTC
GTCGACGACG AGGCCTACAT CCCGATCAAC CGGTCGCGCC GGTCGCAGGA ACTGCTCGCG
TACACGGCCT CCGAGATGGG GTACGACCTG ATCCGGCGGT GGGCGGTCGG TGGTGTCGCC
AGCACGACGT CGTCGATGCC GCAGAGCAGC AGCTCGTCGC CGATGGTGGC CCCGCAGATC
ACGAACAACA TCTCGGTGCG GGACAACGAG GACGCGTACG TGACCGCGCA GGTCGTCTCG
AGCACGGTCG CGTTCCAGGC GCGCACCCGG CGGTGA
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| Protein sequence | MAGGRIDIEV RADTSKVAGD LERGLRGAAG AANRLSAGLG LAAGTAGIAA GLKSIIEVGN
EYAGNLNELM AVTQATGAEM AAAGRLAQDL GSDLTLPATS AADAASAMKE LAKGGLDLDE
AMTAARGTLQ LAAAAQVDAA QAAEIQSDAL NQFGLSADQA SHVADVLANT ANAASGEITD
MAGALKYVGP VAKAVGADID QVATAIGLIA TQGIRGEQAG TSLRGMIASL AAPSKPAAKA
LGELGVEAFD TEGKFVGLRT VTEQLAAAKA RMTEATFALN AATAFGNEGM TVASALASTG
AQAFDEMAEA VGREGGAADV AAAKTEGLGG AIDGLQSQLE SAGIGIYEAI DEPLEAVVRS
LAEAIDEVGP QIARGLETAV AAGRLYGPGL AAAIRERGQV VVQAARDVLM PIARGSVGPV
NTAINAGIKL FADFTAGLRH VVDAARPVAH GIGEIASASA DGDGPVSALA TAIGLLGDGV
VAVTSLLGPA GEGVGGLLSG VASLPGPVLT AVASLVAYRV AVGALQRSEV GGGLRQFVGE
IQAQRQQARE SGEQIGLLSS TVAAYQASQL PAIATTRRFT DAVGELRGTA ASAGRPIGVL
SASVGALAER SPAVAAMRST YRSTFDSISQ SSERAGLAVG IASESLIRGV QSLPSRVSAA
VQAVPTAVGV AAIATADRAR QVISAVQAIP TGIGLAAVSM ADRARSVVSA VQAIPTGVGL
AAVATADRAR QIVSAIQAIP TGIGVAAVNI ADRARSIGSS IASGLDRVPD LAQRTVTALG
TLGAAAGAAT TALGRGLLSA ANDLVGALGG PAGLAIAAAS VGLSILAGRQ QDAAQRAAQH
EAATRSLAEA LRDSNYAITE NIRLQAAKTL QDRGASDLAK ELQIPLSTLT DAYLGNSDAL
SQVNGVLDTY LAQVEGQGQL EGQVAGQNPL ADKAFELRKI LGELIPELGN NVSKQKDLDE
ALKNGRASMS EATETGRSLA SALGVLSSNA SSANDRARAL RTALDALAGG QVDFQAAQAR
VYETLSRISE AFGQNIDKTQ GWGQSLLNVD GSLNITTKNG RTLREMLSDL TGQSADLASA
AYDLSISQGE GVSTALDKAT AAAQKALDGF LDLADEFGIT REQALILAES MGLIPRNVAV
ALSTPGDEKT KQELLLVKSM ADQLPPDKPI TVRTLSEEAK KKLEELGYKV QTTPNGVTIT
ASTKSAEEKL NEFLNKPSTK TVTVIYTGGK PAPNGPMGVN HDGNIIKRFA EGGLHKLMPM
SAGIAQIVPP NTWRVVGDRL VDDEAYIPIN RSRRSQELLA YTASEMGYDL IRRWAVGGVA
STTSSMPQSS SSSPMVAPQI TNNISVRDNE DAYVTAQVVS STVAFQARTR R
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