| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5549 |
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| Symbol | |
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| ID | 8329755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6588700 |
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| End bp | 6590520 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644945989 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_003103213 |
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| Protein GI | 256379553 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.132068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCCA GCGACGCGGG TGAGGTCCTG CGGAGGGTCT TCGGGTACGA GTCTTTCCGC
GGTGACCAGG GCGAGATCGT CGAGCACGTC ATCGGTGGCG GCGACGCGCT CGTCCTCATG
CCCACCGGCG GCGGCAAGTC GCTCTGCTAC CAGATCCCCT CCCTGGTCAG GTCCGGTGTC
GGGGTCGTCA TCTCGCCGCT GATCGCGCTC ATGCAGGACC AGGTCGACGC CCTGCGCGAC
GTCGGCGTGC GCGCGGGCTT CCTCAACTCC ACCCAGTTCC CCGACGAGCG CCAGCTCGTG
GAGTCCGAGT TCCTCGCGGG CGAGCTGGAC CTGCTCTACC TCGCCCCCGA GCGCCTGCGC
CTGGACGCCA CGACCCGCCT GCTGGAGCGC GGCGACGTCG CGCTGTTCGC GATCGACGAG
GCGCACTGCG TCGCCCAGTG GGGCCACGAC TTCCGCCCCG ACTACCTGGC CCTGTCGCAC
CTCAAGGAGC GCTGGCCGGA CGTCCCGCGC ATCGCCCTCA CCGCGACCGC CACCAAGGCC
ACCCACGCCG AGATCGCCAC CCGGCTCGGC CTGGAGGACG CCAAGCACTT CGTCGCCAGC
TTCGACCGCC CCAACATCCA GTACCGGATC GTCCCCAAGA ACGAGCCGAA GAAGCAGCTC
CTCAAGCTCC TGCGCGACGA GCACGCGGGC GACTCCGGCA TCGTCTACTG CCTGTCCCGC
AACTCCACGG AGAAGACCGC GGAGTTCCTG GTGGACAACG GGATCGCGGC CCTGCCCTAC
CACGCGGGCC TGGACGCGGG CACGCGCGCG GCCAACCAGT CGCGGTTCCT GCGCGAGGAC
GGCCTGGTCA TGGTCGCGAC CATCGCGTTC GGCATGGGCA TCGACAAGCC GGACGTCCGG
TTCGTCGCGC ACCTGGACCT GCCGAAGTCC GTCGAGGGCT ACTACCAGGA GACGGGTCGC
GCGGGCCGCG ACGGTCAGCC GTCCACGGCG TGGCTCGCGT ACGGGCTGCA GGACGTGGTG
CAGCAGCGCA AGATGATCGA GGACTCGCAG GGCGACCAGG AGCACCGCCG CCGCCAGGCT
CAGCACCTGG ACGCGATGCT GTCGCTGTGC GAGGCCGTCG ACTGCCGCCG CGCGCGACTG
CTGGAGTACT TCGGCCAGAG CGGCGAGCCG TGCGGCAACT GCGACACCTG CCTCGCCCCG
CCGGAGACGT GGGACGGCAC GGTGCCCGCG CAGAAGGTGC TGTCCACGAT CGTCCGGCTC
AAGCGCGAGC GCAGGCAGAA GTTCGGCGCG GGCCAGATCA TCGACATCCT GCTCGGCCGC
AAGACCGCGA AGGTCATCCA GTTCGACCAC GACTCGCTGT CGGTGTTCGG CATCGGCGAG
GAGCTGAACG AGAGCGGGTG GCGCGCGGTC GTGCGGCAGC TGCTCGCGCA GGGCCTGCTG
GCGGTGGAGG GCGAGTACTC GACGCTGACC ACCACGCCGG GTAGCGACGA GGTGCTGTTC
CAGGGCCGCA AGGTGCTGAT GCGCCGCCAG CCGGAGCGGG TCGAGAAGGT CCGCACGGCG
CGCGGCAGCG GCAAGCAGCG CGCGGACCAG CTGGAGCTGT CGCCGGAGCA GGAGGAGGTC
TTCGAGAGCC TGCGGACCTG GCGCGCGGCC ACGGCGAAGG AGCAGGGCGT GCCCGCGTAC
GTGATCTTCC ACGACGCCAC GCTGCGCCAG ATCGCGAGCA CCGCGCCGAG CACGCTGGAC
GCGCTGGGCG GCATCAGCGG GGTCGGTGAG AACAAGCTCG CGAAGTACGG CCAGCAGATC
ATCGACACCC TGAACCCGTG A
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| Protein sequence | MASSDAGEVL RRVFGYESFR GDQGEIVEHV IGGGDALVLM PTGGGKSLCY QIPSLVRSGV
GVVISPLIAL MQDQVDALRD VGVRAGFLNS TQFPDERQLV ESEFLAGELD LLYLAPERLR
LDATTRLLER GDVALFAIDE AHCVAQWGHD FRPDYLALSH LKERWPDVPR IALTATATKA
THAEIATRLG LEDAKHFVAS FDRPNIQYRI VPKNEPKKQL LKLLRDEHAG DSGIVYCLSR
NSTEKTAEFL VDNGIAALPY HAGLDAGTRA ANQSRFLRED GLVMVATIAF GMGIDKPDVR
FVAHLDLPKS VEGYYQETGR AGRDGQPSTA WLAYGLQDVV QQRKMIEDSQ GDQEHRRRQA
QHLDAMLSLC EAVDCRRARL LEYFGQSGEP CGNCDTCLAP PETWDGTVPA QKVLSTIVRL
KRERRQKFGA GQIIDILLGR KTAKVIQFDH DSLSVFGIGE ELNESGWRAV VRQLLAQGLL
AVEGEYSTLT TTPGSDEVLF QGRKVLMRRQ PERVEKVRTA RGSGKQRADQ LELSPEQEEV
FESLRTWRAA TAKEQGVPAY VIFHDATLRQ IASTAPSTLD ALGGISGVGE NKLAKYGQQI
IDTLNP
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