| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5522 |
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| Symbol | rpsA |
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| ID | 8329728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6557513 |
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| End bp | 6559000 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644945962 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_003103186 |
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| Protein GI | 256379526 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACCG ACACCACCAC TGTCCCGGCT GCCGTCGCGC CGAAGCAGGT CGCTATCAAC
GATATCGGGA CGGAGGAGGA CTTCCTCGCC GCTATCGACA AGACCATCAA GTACTTCAAC
GATGGCGATA TCGTCGAGGG CACGATCGTC AAGGTCGACC GGGACGAGGT CCTGCTCGAC
ATCGGCTACA AGACCGAGGG CGTCATCCCC TCGCGCGAGT TGTCGATCAA GCACGACGTG
GACCCCAACG AGGTCGTCAA GGTCGGCGAC GAGGTTGAGG CCCTTGTTCT CCAGAAGGAG
GACAAGGAGG GTCGTCTGAT CCTGTCGAAG AAGCGCGCCC AGTACGAGCG CGCCTGGGGC
ACCATCGAGG CCCTCAAGGA GAAGGACGAG CCCGTCAAGG GCACCGTCAT CGAGGTCGTC
AAGGGCGGCC TCATCCTGGA CATCGGCCTC CGGGGCTTCC TCCCGGCCTC GCTCGTCGAG
ATGCGCCGCG TCCGCGACCT GCAGCCGTAC GTCGGCCGCG AGCTCGAAGC CAAGATCATC
GAGCTGGACA AGAACCGCAA CAACGTGGTC CTGTCCCGCC GCGCCTGGCT GGAGCAGACG
CAGTCCGAGG TCCGCAGCGA GTTCCTCAAC CAGCTGCAGA AGGGCCAGGT CCGCAAGGGC
GTCGTGTCCT CCATCGTCAA CTTCGGCGCC TTCGTGGACC TGGGTGGCGT GGACGGCCTC
GTGCACGTCT CCGAGCTCTC CTGGAAGCAC ATCGACCACC CCTCCGAGGT CGTCGAGGTC
GGCCAGGAGG TCACGGTCGA GGTCCTGGAC GTCGACATGG AGCGCGAGCG CGTCTCCCTG
TCGCTGAAGG CGACCCAGGA AGACCCGTGG CGCCAGTTCG CCCGCACCCA CGCGATCGGC
CAGATCGTGC CGGGCAAGGT CACCAAGCTG GTTCCGTTCG GCGCGTTCGT CCGCGTGGAC
GAGGGCATCG AGGGCCTGGT CCACATCTCC GAGCTGGCCG AGCGCCACGT GGAGATCCCG
GAGCAGGTCG TGCAGGTCGG CGACGACGTC ATGGTCAAGG TCATCGACAT CGACCTGGAC
CGCCGCCGGA TCTCGCTGTC GCTCAAGCAG GCCAACGAGG GCTTCACGGT CGACTCCGAG
TTCGACCCGA CCCAGTACGG CATGGCCGCC GAGTACGACG ACCAGGGGAA CTACATCTAC
CCCGAGGGCT TCGACCCGGA GACCCAGGAG TGGCAGGACG GCTTCGACAA GCAGCGCGAG
GAGTGGGAGC GGCAGTACGC CGAGGCCCAC ACGCGCTACG AGGCCCACAT GAAGCAGGTC
GCCAAGGCCG CCGCTGCCGA GGAAGAGGCC GCGGGCGAGA CCAACTACTC GTCCGGTGGC
GACGCCCCGG CCGCGTCGTC GGGTGGCGCT CCGGCTCAGG CCGGCGGCAC GCTGGCCAGC
GACGAGCAGC TCGCGGCGCT CCGCGAGAAG CTGTCGGGCG GCATGTGA
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| Protein sequence | MSTDTTTVPA AVAPKQVAIN DIGTEEDFLA AIDKTIKYFN DGDIVEGTIV KVDRDEVLLD
IGYKTEGVIP SRELSIKHDV DPNEVVKVGD EVEALVLQKE DKEGRLILSK KRAQYERAWG
TIEALKEKDE PVKGTVIEVV KGGLILDIGL RGFLPASLVE MRRVRDLQPY VGRELEAKII
ELDKNRNNVV LSRRAWLEQT QSEVRSEFLN QLQKGQVRKG VVSSIVNFGA FVDLGGVDGL
VHVSELSWKH IDHPSEVVEV GQEVTVEVLD VDMERERVSL SLKATQEDPW RQFARTHAIG
QIVPGKVTKL VPFGAFVRVD EGIEGLVHIS ELAERHVEIP EQVVQVGDDV MVKVIDIDLD
RRRISLSLKQ ANEGFTVDSE FDPTQYGMAA EYDDQGNYIY PEGFDPETQE WQDGFDKQRE
EWERQYAEAH TRYEAHMKQV AKAAAAEEEA AGETNYSSGG DAPAASSGGA PAQAGGTLAS
DEQLAALREK LSGGM
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