| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5500 |
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| Symbol | |
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| ID | 8329706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6530198 |
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| End bp | 6531400 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644945940 |
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| Product | helix-turn-helix domain protein |
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| Protein accession | YP_003103164 |
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| Protein GI | 256379504 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000165306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGCCCG AGCTGTGGGA GAGCCGCGAG GTGCACGCCG CCGTCGCGTC GGACGCGCCC
GGCGTGCTCG TCGCCATCGC GCGCCGCGCC CACGGGTTGC GCCAAGACGA GCTCGGCGCG
CTGGCCGGCT ACTCGCAGTC CGCGATCTCC CGCCTGGAAT CAGGCAGCGG CATCGCTTAC
GACCTGCGCG TGCTGCGCAC CATGCAGCGG CTGCTCGGCA TCCCGGCCCA CCTGCTCGGC
CTGGCCGACC GGGCCGCCCG CCCGTCCGTC TCGCCCCGCT CCGACCGACC CGTCGACCCG
GCAGCCCTCA CCGCGCTGCG CGCGGCCACC GCCCGGCGCG GTGGGCCCGT GCGGCAGTTG
CTGGTGCTGC GCCGCATCCT CGACGACGCG CACCACCGCC AAGGCTGGCG CGCCCTGGTC
CCCGCCACCC GCTCGCTGTT CGACTTCGCC GACGCCCTGC GCCGCGCCGC CGACGGCGAC
CACCGCCGCA GGCTGCTCGC CGTCGCCGCG ACCTACGCCG AGTTCTCCGG CCTGCTGTAC
GAGGAAGTCG GCGACCGCAG CGGCGCCGTC GAGTGGACCA CCCGCGCCCT GGAGCAGGGG
CAGGCCGCCG ACGACCCCGA CGTCGTCGCC CACTCCTACG TGCGACTGGC CCAGCTCGCC
GAACCCGACG GCGAGCGCGT CCTCACGCTG ACCCGTGCCG CCCTGCGCGA GCGCGGCATC
GGCCCACGCA CCCTCGCACT GGTCCTGCGG CAGCAGGCTC GCGGACTGGC GATGGCGGGT
GACGAGACGT GCATGGCCCG GTTGGACCAC GCGCGCGAAC TCCTCGTAGC GGTTGCCAGG
GACCCTGAGC CGGACAACGG CGAATACCGC ATAGGATACC GCCTTTCGGA GCAGCACGTC
GAGCTCGAAC GGGCGGCTTG TTGGCTCGAA CTCGGGCAAC CGCACCGCGC GATCGCGGGC
TACGAGGCGC TGCGCCGCCG CCGGTGGGGC CACGCCCGCG CCGCCGAACG GGGCCTCCAC
ACCGCCCGCC TGGCCGCCGC GCACGCCGCC GCCGGACACC GTGATCAAGC CGTGGCCTGC
GGTTACGAGG CGTTGGACGC GGCGAGGGAC AGCGGTTCGG GGCTGGTGCT GGTCGAGCTG
GGCAGGCTCG GCCCGTGGGT GGGGGAGCGG GACGTGCGCG AGCTCGCGCG GTGGCTCGGC
TGA
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| Protein sequence | MPPELWESRE VHAAVASDAP GVLVAIARRA HGLRQDELGA LAGYSQSAIS RLESGSGIAY
DLRVLRTMQR LLGIPAHLLG LADRAARPSV SPRSDRPVDP AALTALRAAT ARRGGPVRQL
LVLRRILDDA HHRQGWRALV PATRSLFDFA DALRRAADGD HRRRLLAVAA TYAEFSGLLY
EEVGDRSGAV EWTTRALEQG QAADDPDVVA HSYVRLAQLA EPDGERVLTL TRAALRERGI
GPRTLALVLR QQARGLAMAG DETCMARLDH ARELLVAVAR DPEPDNGEYR IGYRLSEQHV
ELERAACWLE LGQPHRAIAG YEALRRRRWG HARAAERGLH TARLAAAHAA AGHRDQAVAC
GYEALDAARD SGSGLVLVEL GRLGPWVGER DVRELARWLG
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