| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5407 |
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| Symbol | |
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| ID | 8329609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6420660 |
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| End bp | 6421601 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644945844 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003103072 |
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| Protein GI | 256379412 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.439375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCACCG TGGCCGTGCT GGCGCTGGAC GACGTGATCC CGTTCGACCT GTCGACCCCG
CTGGAGGTGT TCTCCCGCAC CGCGCTCCCG GACGGCTCCC CCGCCTACCG GGTGGTGGTG
TGCGGCGAGC GCCGCGAGGT CGGGGCGGGC CTGTTCTCGG TGCGCGTCCC CGCCGGGCTG
GAGGCGCTGG CCGAGGCGGA CACGATCATC GTGCCGGGCA CCGCGCGGCC CCACGTCCCA
CCGTCCGAGC GGGTGCTGGA CGCGCTGCGC GAGGCCGCCG GGCGGGGCGC GGTGCTGGCC
TCGATCTGCT CCGGGGCGTT CGTCCTGGCC GCGACCGGTC TGCTCGACGG GCGCAGGGCC
ACCACGCACT GGATCGCCGC CGACCTGTTC CGCGCGCGGT TCCCGGCGGT CGAGCTGGAC
CCGGACGTGC TGTACGTGGA CAACGGGGAC CTGCTCACCT CGGCGGGCGC GGCGGCGGGG
CTGGACCTGT GCCTGCACCT GGTGCGCCGC GACCACGGCT CCGAGACCGC CGCGCACGCC
GCCCGGCTGT CCGTGGTGCC GCTGGAGCGG GAGGGCGGGC AGGCGCAGTT CATCCCGTCC
ACGCACCCGG TGGCCCCGGA GGGCTCGGAG CTGGAGCCGC TGCTGGCGTG GCTGGACGAG
AACTGCGCGC GCGAGCTGAC CGTGGACGAC ATCGCCGCCC GCGCCGCCAT GAGCACCCGC
ACGCTGAACC GGCGCTTCCG CGCGCAGACC GGCACGACCC CGCTGCGCTG GCTGCACGTG
CGGCGGGTGC GGCTGGCGCA GCGGCTGCTG GAGGCGACCG GGCGGCCGGT GGACCTGATC
GCCACGCAGG TCGGGTTCGG CTCGCCGACG GCGTTCCGGG ACCGGTTCAA GCGGGTGGTC
GGCACCAGCC CGCAGGCGTA CCGGGCGGCG TTCCGGGGGT AG
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| Protein sequence | MRTVAVLALD DVIPFDLSTP LEVFSRTALP DGSPAYRVVV CGERREVGAG LFSVRVPAGL
EALAEADTII VPGTARPHVP PSERVLDALR EAAGRGAVLA SICSGAFVLA ATGLLDGRRA
TTHWIAADLF RARFPAVELD PDVLYVDNGD LLTSAGAAAG LDLCLHLVRR DHGSETAAHA
ARLSVVPLER EGGQAQFIPS THPVAPEGSE LEPLLAWLDE NCARELTVDD IAARAAMSTR
TLNRRFRAQT GTTPLRWLHV RRVRLAQRLL EATGRPVDLI ATQVGFGSPT AFRDRFKRVV
GTSPQAYRAA FRG
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