| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5275 |
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| Symbol | |
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| ID | 8329477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6273904 |
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| End bp | 6276873 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644945714 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003102942 |
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| Protein GI | 256379282 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTGGG ACTTGGGGAT CGGGTTTGGC GACGACGAGG TCGGGGTGCT CGGGCCGCTG
CTCGTGCGGC GGGGTGGGGT GGTCGTCGCC GTCACCGCGC CCAAGCAGCG GATCGTGCTC
GCCTCGCTGG TCATGGCCGC CAACCGGGCC GTGTCGTCGG CCGAGCTGGT CCGGGCCGTC
TGGGGTGACC GGGCGCCCGC CCGTGCGGCG CACACGCTCG CCGTCTACGT CATGCGGCTG
CGGCGGGCGC TCGGGGAGCC GCAGCTCGTC CACACCACGC CCTCCGGTTA CCTGATCAGC
CTGCCGCACG GGGCCGTCGA CCTGCACCGG TTCGCCGACC ACGCCGCGCA CGGGGCGCTC
GCCGCCTCCG CCAAGGACTT CGGCTCCGCC GTCGAGCACT ACCAGCGGGC CCTCGACTGC
TGGCGCGGCC CGGCGCTCGC GGACGTGCCG TCCGAGGCCC TGCACGCCGA CGAGGTCCCG
GCGCTGGTCG AGGAGCAGCT GCGGGTCACG GCCGAGCTGG TCGACGCCCG GCTGCGGCTC
GGGCACGGGG CCGAGCTGGT GCCGGACCTG CGGCGGCTGA CCGCGCGCCA CCCGCTGCGC
GAGCGGTTCT GGTCGCAGCT CATGGTCGCG CTCCACCGCG CGGACCGCCA GGCGGACGCG
CTCGACGCCT ACCGCCAGGC CGGCACCGCC CTCGCCCGCG AGCTCGGCGT CGACCCCAGC
GAGTCGCTCA GGGCCGTGCA CCACTCGATC CTCACCGGCG ACCCCGCGCT CCGGGGGCCG
CTGCCCTCCG GGTGGGCCCC GGTGTCGCAG CTGCCCGCGC CGGTCGGGAA CTTCGTCGGG
CGCGCCGACG AGCTGGACCG GGTCACCGCC CTGCTCGCCG GGCCCGCCGC CGTCGTCGCC
GTGTGCGGGC CGCCAGGCGT GGGGAAGACC GCCTTCGCGG TGACGGTCGG TCACTCGGTG
CGTGAGCGCT ACCACCACGG GCAGCTGTAC GCGGACCTGC GCGGCCACTC CACGTCACCG
CCGCTCAGCA CCACCACCGT GCTCGGCCGG TTCCTCCGGG CCCTCGGCGC GCGCCCCGAC
AGCATCCCCG CCGACGAGGC CGAGCTCGTG CGCGCCTACC GCGACCGGCT GCGCGGGCGC
CGGGTGCTGA TCACGCTCGA CAACGCGGCC TCCGCCGCCC AGGTGCTGCC GCTGCTGCCG
GACGTCCCCG AGTGCTCCGT GGTGATCACC AGCCGGAACG AGCTGGCCGG GGACGTCGGG
GCCGCGGCGG TCCGGCTGGA CGTGCTGCGC GGCGACGAGG CGTGGATGCT GCTGACCCGC
TCGCTCGCCC CCGAGGCCGC CGACGAGCAG GGCGACGCGC TGCGCGAGCT GGCCCGGCTG
TGCGGCTACC TGCCGCTGGC GCTGCGGATC GCGCTCGGCA ACCTCGTCGG CGCGCACACC
ACCGACATCC GGTCCTATGT GGACGACCTG CGCGGCGGGG ACCGCCTGTC CGCCTTGGCG
GTCCCGGACG ACGACAGCGC GGCGGTGCGC CGGGCGTTCG ACCTGTCGCA CGCCGCGCTG
CGGCCGGACG CCGCGAAGTT GTTCCGCCTC ACCGGGTTGC TGCCCGGCCC GGACTTCAGC
GCGTTCGGCG CCGCCGCCCT GCTGGGCGCG GACGAGGCCA CCGCCCGCGC GCTCGCCGAG
GAGCTGGCCT CGGCGAACCT GGTGCAGCGC GTGGGCGACG AGCGGTTCGC GGTGCACGAC
CTGCTGCGCG AGTACGCGGC CGAACGGGCC CGCGCCGCCG GTGACGACCT GGAGGCCGCG
CGCGGCAGGC TGTTCGACTG GTACCTGAGC ACCGCCTCCG ACGTGGGCGA CGTGCTGTTC
CCCGAGGTCC GGCCCGCGCG CGGGCGGGCA GACCTGCCGG ACGCCCGCAC GGCGCGCGCC
TGGTTGGAGG CGGAGCGGCC GAGCCTGCTG GCGGCCACCG AGCGGTGCGC GCGCCTGGGG
CCGCTGCCGA TGGCCTGGTC GCTGGTCGAG GCGGTCGGCG GGTTCCTGGG CTCGCACGGG
CACCACGGCG GGTTCCTGAA CGCGGTGCGC GCGGCGGGCG ACGCGGCGCG CGCGGCCGGG
GACACCGAGG CCGGGGGCGT GGTCCTGGCG CACCTGGTGG CGGCGCACCG GAACCTCGGC
GACCTGCGGG CCGCCCGCGA CGCAGCCCGC TCGGGGAACC CGGTGGGGCG CGCGGTGTGG
CTGCTCGCCG GGGTCGCGGG CGTGGTCGCG CTGGACGTGG GCGAGCTGGC CGAGGCCGAG
GACCGGTTCC GGGAAGTCGT TGGCGCGTCA GGGGAACTGG CGCACGCCCG GTGCGCCGGG
CTGATCGGGC TCGGCGCGGT CCGCCTGGCG CGCGGGGAGC TCGACGCCGC CGAGGCGCTG
CTGCGCGAGG GCCACGGGCT GGCGCTGCGG GTGGGCGCGG TGAACCTGGC GGCGTCCGGC
GCGGACCTGC GCGGGCGGTG CCGGGGCGCG CGGGGCGACC ACCCCGGCGC GGTCGACCTG
CTGCGGGAGG CGCGGGACGG GTGGGCCCGC ACCGGGGCCC GGCCGCCGCA CGCGGAGACC
ACCGCGCACC TGGCCGCCGC GCTGTGCCTG GCCGGGGAGC ACGGCGAGGC GCTGCGGACC
GCGCAGCGGG CGCTGGCCCT GGTGCAGGAG CTGGGCGGCA GCCCCCGGAT CGAGGCGGAC
GTGCACAACG CGCTGGGCCT GGTGCAGCGG CACCTGGTGA ACCCCGAGGC GGCGGTCGCG
GCGCACCTGC GGGCGCTGGA GCTGTCCGGC GGGGTCGGCT ACCGGCACGG GGTCGTGCAG
GCCCACGTGC TGCTGGCGCC CGCGCTGCTG GCCGCCGGGC GGCGCGGGGA CGCGGTGCGG
CACGCGCGGA TCGGCATCGG GCTGGCCGGG GAGACCGGGT ACGGCGGGCT GCGGCAGGCC
GCCGAGTCGC TGCTGGCCGC GTTGGGCTGA
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| Protein sequence | MGWDLGIGFG DDEVGVLGPL LVRRGGVVVA VTAPKQRIVL ASLVMAANRA VSSAELVRAV
WGDRAPARAA HTLAVYVMRL RRALGEPQLV HTTPSGYLIS LPHGAVDLHR FADHAAHGAL
AASAKDFGSA VEHYQRALDC WRGPALADVP SEALHADEVP ALVEEQLRVT AELVDARLRL
GHGAELVPDL RRLTARHPLR ERFWSQLMVA LHRADRQADA LDAYRQAGTA LARELGVDPS
ESLRAVHHSI LTGDPALRGP LPSGWAPVSQ LPAPVGNFVG RADELDRVTA LLAGPAAVVA
VCGPPGVGKT AFAVTVGHSV RERYHHGQLY ADLRGHSTSP PLSTTTVLGR FLRALGARPD
SIPADEAELV RAYRDRLRGR RVLITLDNAA SAAQVLPLLP DVPECSVVIT SRNELAGDVG
AAAVRLDVLR GDEAWMLLTR SLAPEAADEQ GDALRELARL CGYLPLALRI ALGNLVGAHT
TDIRSYVDDL RGGDRLSALA VPDDDSAAVR RAFDLSHAAL RPDAAKLFRL TGLLPGPDFS
AFGAAALLGA DEATARALAE ELASANLVQR VGDERFAVHD LLREYAAERA RAAGDDLEAA
RGRLFDWYLS TASDVGDVLF PEVRPARGRA DLPDARTARA WLEAERPSLL AATERCARLG
PLPMAWSLVE AVGGFLGSHG HHGGFLNAVR AAGDAARAAG DTEAGGVVLA HLVAAHRNLG
DLRAARDAAR SGNPVGRAVW LLAGVAGVVA LDVGELAEAE DRFREVVGAS GELAHARCAG
LIGLGAVRLA RGELDAAEAL LREGHGLALR VGAVNLAASG ADLRGRCRGA RGDHPGAVDL
LREARDGWAR TGARPPHAET TAHLAAALCL AGEHGEALRT AQRALALVQE LGGSPRIEAD
VHNALGLVQR HLVNPEAAVA AHLRALELSG GVGYRHGVVQ AHVLLAPALL AAGRRGDAVR
HARIGIGLAG ETGYGGLRQA AESLLAALG
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