Gene Amir_5257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5257 
Symbol 
ID8329459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6255717 
End bp6256175 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content74% 
IMG OID644945696 
ProductPTS system, glucose subfamily, IIA subunit 
Protein accessionYP_003102924 
Protein GI256379264 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2190] Phosphotransferase system IIA components 
TIGRFAM ID[TIGR00830] PTS system, glucose subfamily, IIA component 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCTCA GCGTGCAGTC CCCCGTGAGC GGTCGCCCGG TGTCCCTGGA CCAGGTGCCG 
GACCCGGTGT TCGCGCAGGC GATGGTCGGA CCCGGCTTCG CGGTCGAACC GGACCGCGAG 
GCGGCCGACG TGCTGTCCCC GATCACCGGG ACGATCGTGA CCCTGCACCC GCACGCGTTC 
GTCGTGGCGG GCGCCGACGG CGGCGCGGTC CTGGTGCACC TGGGCATCGA CACCGTGAAG 
CGCAAGGGCG AGGGCTTCAC CGCGCACGTC GAGAAGGGCG ACGCCGTGGA GGCTGGTCAA 
CGCGTGGTGA CCTGGAACCC CGCCGAGGTG GAGGCGGCGG GCTACGCCCC GATCTGCCCC 
GTGGTGGCCC TGGAGGCGGA CCCGTCCGCC CTGTCCCCGA CGGCCCCCTG GGGCGGCCAC 
GTGGACGCAG GGGAGCCCTT GTTCACCTGG GACCGCTGA
 
Protein sequence
MTLSVQSPVS GRPVSLDQVP DPVFAQAMVG PGFAVEPDRE AADVLSPITG TIVTLHPHAF 
VVAGADGGAV LVHLGIDTVK RKGEGFTAHV EKGDAVEAGQ RVVTWNPAEV EAAGYAPICP 
VVALEADPSA LSPTAPWGGH VDAGEPLFTW DR