| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5241 |
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| Symbol | |
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| ID | 8329443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6236327 |
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| End bp | 6239626 |
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| Gene Length | 3300 bp |
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| Protein Length | 1099 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644945680 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_003102908 |
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| Protein GI | 256379248 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.560222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAAGA GGACTGACCT CAAGCACGTT CTGGTGATCG GGTCTGGCCC GATCGTGATC
GGCCAGGCCT GCGAGTTCGA CTACTCGGGC ACCCAGGCGT GCCGGGTGCT GCGCGAGGAG
GGCATCCGGG TCTCCCTGGT CAACTCCAAC CCCGCGACGA TCATGACGGA CCCGGAGTTC
GCCGACGCCA CCTACGTCGA GCCGATCACC GCCGAGTTCG TCGAGAAGGT CATCGCGGCC
GAGCGCCCCG ACGCGGTGCT CGCCACCCTG GGCGGGCAGA CCGCGCTCAA CACCGCCATC
GCGCTGCACG AGCGCGGCGT GCTGGAGAAG TACGACGTCG AGCTGATCGG CGCCGACATC
GACGCCATCC AGCGCGGCGA GGACCGCCAG ATGTTCAAGG ACATCGTGCG CGAGATCGGC
GCCGAGGTCC CGCGCAGCGC GGTGTGCCGC ACCATGGACG AGGTCCGCGC GACCGTGGCC
GACCTCGGCC TGCCGGTCGT CATCCGGCCC TCGTTCACCA TGGGCGGCCT CGGCTCCGGC
ATGGCCCACA CCCCCGAGCA GCTGGAGCGG CTCGCCGCCA CCGGCCTCGC CGAGTCCCCG
GTCACCGAGG TGCTGATCGA GGAGAGCGTG CTCGGGTGGA AGGAGTACGA GCTGGAGCTG
ATGCGCGACC GCAACGACAA CGTCGTGGTC ATCTGCTCCA TCGAGAACAT CGACCCGATG
GGCGTGCACA CCGGCGACTC GGTCACCGTC GCGCCCGCGA TGACCCTGAC CGACCGCGAG
TACCAGCACA TGCGCGACGT CGGCATCGCG GTCATCCGCG CGGTCGGCGT GGACACCGGC
GGCTGCAACA TCCAGTTCGC CATCCACCCG CAGACCGGGC GCATGGTCGT CATCGAGATG
AACCCGCGCG TCTCCCGCTC CTCGGCGCTC GCGTCCAAGG CGACCGGTTT CCCGATCGCG
AAGATCGCCG CGAAACTGGC CATCGGCTAC ACCCTCGACG AAATCCGCAA CGACATCACG
GGGGAGACCC CGGCCTCATT CGAGCCCGCG CTCGACTACG TCGTCGTGAA GGTCCCCCGG
TTCGCCTTCG AGAAGTTCCC CGGCGCGGAC CGCACGCTCA CCACGACGAT GAAGTCCGTC
GGCGAGGCGA TGTCGTTCGG GCGCAGTTTC ATCGAGGCGC TCGGTAAAGC CCTGCGGTCC
ATGGAAACGA AGTCCGGCGG TTTCTGGACC ACCCCGGACC CCGAGGGCGA CCTGGCGTCG
GCCCTGGAGG AGCTGCGGAC CGGCCACGAC GGACGGCTCT ACACCGTCGA CCGGGCGCTG
CGCCTGGGCG CGACGGTCGA GCAGGTCCAC GAGGCCTCCG GCATCGACCC GTGGTTCGTG
GAGCAGATCG CCTGGCTGAT CGACCTGCGC GGCGAGCTGG AGTCCGCGCC GGTGCTGGAC
GAGGCGCTGC TGCGCCGCGC CAAGCGCGCG GGCCTGTCCG ACCGGCAGAT CGCCGCGCTG
CGGCCCGAGC TGGCGGGCGA GGACGGCGTG CGGGCGCTGC GGCACCGGCT GGCCGTGCGC
CCGGTCTACA AGACCGTCGA CACCTGCGCG GCCGAGTTCG CCGCCGCCAC GCCCTACCAC
TACTCGGCGT ACGAGTCCGA CCCGGACGCC GAGTCCGAGG TCACCGAGCA GCGCGAGCGC
CCCAAGGTGC TGATCCTGGG CTCCGGCCCG AACCGGATCG GCCAGGGCAT CGAGTTCGAC
TACTCGTGCG TGCACGCGGC CATGGCGCTG CGCGAGGCCG GGTACGAGAC CGTGATGGTC
AACTGCAACC CGGAGACCGT CTCCACCGAC TACGACACCT CGGACCGGCT CTACTTCGAG
CCGCTGACCT TCGAGGACGT CATCGAGGTC GTGCACTCCG AGCGCGCGTC CGGCACCGTC
GCGGGCGTCA TCGTCCAGCT CGGCGGCCAG ACCCCGCTCG GCCTGGCGCA GCGCCTCGCG
GACGCGGGCG TCCCGGTCGT GGGCACCTCG CCCAGGGCCA TCCACCTCGC CGAGGACCGC
GGCGAGTTCG GCAAGGTCCT CGTGGCCGCC GGGCTGCCCG CGCCCAAGTA CGGCACCGCC
AACTCGTTCG ACGAGGCCAA GGCCATCGGC GACGAGATCG GCTACCCGGT GCTCGTGCGG
CCCTCGTACG TGCTCGGCGG GCGCGGCATG GAGATCGTCT ACGACGAGGA CACGCTGCGC
GGCTACATCG AGCGCGCCAC CGAGATCAGC CCGGAGCGCC CGGTGCTGGT CGACCGGTTC
CTCGACGACG CCATCGAGAT CGACGTGGAC GCGCTCTACG ACGGCCACGA GGTGTTCATC
GGTGGCGTCA TGGAGCACAT CGAGGAGGCC GGGGTGCACT CCGGCGACTC GGCGTGCGCG
CTGCCGCCGA TCACCCTGGG CGAGACCGAC GTGGACGCGG TGCGCCGCTC CACGCTGGCC
ATCGCCGAGG GCATCGGGGT GCGCGGCCTG CTGAACGTGC AGTACGCGCT CAAGGACGAC
GTGCTGTACG TGCTGGAGGC CAACCCGCGC GCCTCGCGGA CCGTGCCGTT CGTGTCCAAG
GCGACGGCGG TGCCGCTGGC CAAGGCGGCG GCCCGGATCA TGCTGGGCGC GACCGTGGCC
GAGCTGCGGA CCGAGGGCCT GCTGCCCGCC GAGGGCGACG GGGCCAAGCT GCCCCCGCAC
GCCCCCGTGG CGGTCAAGGA GGCGGTCCTG CCGTTCCACC GCTTCCGCAC CCCCGACGGC
AAGGGCGTCG ACTCGCTGCT CGGCCCGGAG ATGAAGTCGA CCGGCGAGGT CATGGGCATC
GACGTGTCCT TCGGCACCGC GTTCGCCAAG TCCCAGACCG CCTCCTACGG CTCCCTGCCC
ACCTCGGGCA AGGTGTTCGT GTCGGTGGCC AACCGGGACA AGCGGGCCAT GATCTTCCCG
GTCAAGCGGC TCGCCGACCT GGGCTTCGAG GTGCTGGCCA CGGCCGGGAC CGCCGAGGTG
CTGCGCCGCA ACGGCATCCC CTGCACCGTC GTGCGCAAGC ACTTCGAGGG CGAGGGGAAC
GTCGTCGACC TGATCCTCGG CGGCGGCGTC GACATGATCA TCAACACCCC GTACGGCAAC
AGCGGGCCCC GCGTGGACGG CTACGAGATC CGCACGGCGG CCGTGGCCAG GGACATCCCG
TGCGTGACCA CGATCCAGGG CGCGGCGGCG GCCGTGCACG GCATCGAGGC CGCGATCCGC
GGTGACATCG GCGTGCGGCC CCTCCAGGCG CTCCAGGCGG CGCTGAGGGG GCAGGCGTGA
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| Protein sequence | MPKRTDLKHV LVIGSGPIVI GQACEFDYSG TQACRVLREE GIRVSLVNSN PATIMTDPEF
ADATYVEPIT AEFVEKVIAA ERPDAVLATL GGQTALNTAI ALHERGVLEK YDVELIGADI
DAIQRGEDRQ MFKDIVREIG AEVPRSAVCR TMDEVRATVA DLGLPVVIRP SFTMGGLGSG
MAHTPEQLER LAATGLAESP VTEVLIEESV LGWKEYELEL MRDRNDNVVV ICSIENIDPM
GVHTGDSVTV APAMTLTDRE YQHMRDVGIA VIRAVGVDTG GCNIQFAIHP QTGRMVVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAIGY TLDEIRNDIT GETPASFEPA LDYVVVKVPR
FAFEKFPGAD RTLTTTMKSV GEAMSFGRSF IEALGKALRS METKSGGFWT TPDPEGDLAS
ALEELRTGHD GRLYTVDRAL RLGATVEQVH EASGIDPWFV EQIAWLIDLR GELESAPVLD
EALLRRAKRA GLSDRQIAAL RPELAGEDGV RALRHRLAVR PVYKTVDTCA AEFAAATPYH
YSAYESDPDA ESEVTEQRER PKVLILGSGP NRIGQGIEFD YSCVHAAMAL REAGYETVMV
NCNPETVSTD YDTSDRLYFE PLTFEDVIEV VHSERASGTV AGVIVQLGGQ TPLGLAQRLA
DAGVPVVGTS PRAIHLAEDR GEFGKVLVAA GLPAPKYGTA NSFDEAKAIG DEIGYPVLVR
PSYVLGGRGM EIVYDEDTLR GYIERATEIS PERPVLVDRF LDDAIEIDVD ALYDGHEVFI
GGVMEHIEEA GVHSGDSACA LPPITLGETD VDAVRRSTLA IAEGIGVRGL LNVQYALKDD
VLYVLEANPR ASRTVPFVSK ATAVPLAKAA ARIMLGATVA ELRTEGLLPA EGDGAKLPPH
APVAVKEAVL PFHRFRTPDG KGVDSLLGPE MKSTGEVMGI DVSFGTAFAK SQTASYGSLP
TSGKVFVSVA NRDKRAMIFP VKRLADLGFE VLATAGTAEV LRRNGIPCTV VRKHFEGEGN
VVDLILGGGV DMIINTPYGN SGPRVDGYEI RTAAVARDIP CVTTIQGAAA AVHGIEAAIR
GDIGVRPLQA LQAALRGQA
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