| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5206 |
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| Symbol | |
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| ID | 8329408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6201572 |
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| End bp | 6203521 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644945645 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_003102873 |
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| Protein GI | 256379213 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGACC CGTCGACCTA CCGACCCGCC GCCGGGAGCA TCCCGGAGGC CCCCGGTGTC
TACAAGTTCC GCGACCCCAC TGGGCGGGTC GTCTACGTCG GCAAGGCGAA GAACCTCCGC
TCCCGGCTGA ACTCCTACTT CGCCGACCTC TCCGGCCTGC ACCCGCGCAC CCGCCAGATG
GTCACCACCG CCGCGAGCGT CGAGTGGACC GTTGTCGGCA CCGAGGTCGA GGCGCTCCAG
CTGGAGTACA ACTGGATCAA GGAGTTCGAC CCGCGCTTCA ACGTCCGCTA CAAGGACGAC
AAGTCCTACC CGATGCTCGC GGTGACCCTG AACGAGGAGA TCCCGCGCCT GCACGTCTAC
CGGGGCCCGC AGCGCAGGGG CGTGCGCTAC TTCGGCCCCT ACCCGCACGC CTGGGCCCTG
CGCGAGACCC TGGACATGCT GCTGCGCGTC TTCCCCGCCC GCACCTGCAC CGGCGGCGTC
TTCAAGCGCC ACGAGCAGAT GGGCCGCCCC TGCCTGCTCG GCTACATCGA CAAGTGCTCC
GCCCCCTGCG TCGGCCGGGT CTCCCCGGAC GAGCACCGGG CCATCGTCGG CGAGTTCTGC
GACTTCTTCG CGGGCCGCAC CGACGGCATG GTCCGCCGCC TGGAGCGCGA GATGAACGCC
GCCGCCGAGG AGCTGGAGTT CGAGCGGGCC GCCCGGCTGC GCGACGACCT GTCCGCGCTG
CGCCGCGCCG TCGAGAAGCA GGCCGTCGTG CTCGGCGACG GCACCGACGC CGACGTGGTC
GCGTTCGCCA CCGACGACCT GGAGGTCTCC GTCCAGGTCT TCCACGTGCG CGGCGGCCGG
GTGCGCGGGC AGCGGGCCTG GGTGGTGGAC CGGGAGAACT CCGAGGGCGT CCCCGCCCTG
GTGGACCGCT TCCTCACCCA GTTCTACGGC GGCCAGGCCG AGGCCGCGGG CGCCGCCGCC
GAGGACGCCG CCCCGGTGCC GCGCGAGGTC CTCGTGCCCG AGCTGCCCGA CGACGCCCCC
GCCCTGGAGC GCTGGCTGGG CGGCCTGCGC GGCACGAAGG TCGGCCTGCG GGTGCCGCAG
CGCGGCGACA AGCGCGACCT CATGGCGACC GTCGAGCGCA ACGCCAAGGA GGAGCTCCAG
CAGCACAAGC TGCGCCGCGC GGGCGACCTC ACGGCCCGCT CCGCCGCCCT CCAGGAGCTC
CAGGACGCCC TCGACCTGCC CAGCGCGCCG CTGCGGATCG AGTGCGTCGA CATCAGCCAC
ACCCAGGGCA CCGACGTGGT CGCCTCCCTC GTGGTCTTCG AGGACGGCCT GCCGCGCAAG
TCCGAGTACC GCCGCTTCGC CCTGCGCGAG GCCGCCACCG AGGGCGACGT CGCCTCCATC
GCCGAGGTCG TGCGCCGCCG CTTCCAGGCC TACCTGAAGG AGACCGCCGA GGCGGGCGAC
GACGCCAAGC CCGGCATCGA CCCGGAGACC GGCAAGCCCC GCCGCTTCGC CTACGCGCCG
AACCTGCTGG TCGTGGACGG CGCCGGACCG CAGGCCACGG CCGCCGCGGG CGTGCTCGCC
GAGCTGGGGA TCGAGAACGT CGCCGTCGTC GGACTCGCCA AGCGCCTGGA GGAGGTGTGG
CTGCCGGACG ACCCGGACCC GACTATCCTG CCCCGCACCA GCACAGCCCT CTACCTGCTC
CAGCACCTGC GCGACGAGGC GCACCGGTTC GCCATCGCCT ACCACCGCCA GAAGCGGTCC
AAGCGCATGA CGGCCTCGGA GCTGGACGAC GTGCCCGGCC TCGGCCAGAC GCGCAAGGCG
GCGCTGCTGA AGCACTTCGG CTCACTGCGG AAGCTGCGTG AGGCGAGCAT CGAGGAGATC
AGCGGGGTGC CCGGTGTGGG ACGGCGCACC GCCGAGGCCG TGCGCGCCAG ACTGGGCGCG
GCGGCCGGTA CCGAAGGGGA GCGAACGTGA
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| Protein sequence | MADPSTYRPA AGSIPEAPGV YKFRDPTGRV VYVGKAKNLR SRLNSYFADL SGLHPRTRQM
VTTAASVEWT VVGTEVEALQ LEYNWIKEFD PRFNVRYKDD KSYPMLAVTL NEEIPRLHVY
RGPQRRGVRY FGPYPHAWAL RETLDMLLRV FPARTCTGGV FKRHEQMGRP CLLGYIDKCS
APCVGRVSPD EHRAIVGEFC DFFAGRTDGM VRRLEREMNA AAEELEFERA ARLRDDLSAL
RRAVEKQAVV LGDGTDADVV AFATDDLEVS VQVFHVRGGR VRGQRAWVVD RENSEGVPAL
VDRFLTQFYG GQAEAAGAAA EDAAPVPREV LVPELPDDAP ALERWLGGLR GTKVGLRVPQ
RGDKRDLMAT VERNAKEELQ QHKLRRAGDL TARSAALQEL QDALDLPSAP LRIECVDISH
TQGTDVVASL VVFEDGLPRK SEYRRFALRE AATEGDVASI AEVVRRRFQA YLKETAEAGD
DAKPGIDPET GKPRRFAYAP NLLVVDGAGP QATAAAGVLA ELGIENVAVV GLAKRLEEVW
LPDDPDPTIL PRTSTALYLL QHLRDEAHRF AIAYHRQKRS KRMTASELDD VPGLGQTRKA
ALLKHFGSLR KLREASIEEI SGVPGVGRRT AEAVRARLGA AAGTEGERT
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