Gene Amir_5198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5198 
Symbol 
ID8329400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6193487 
End bp6194653 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content72% 
IMG OID644945637 
ProductPhosphoglycerate kinase 
Protein accessionYP_003102865 
Protein GI256379205 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.459377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGACTC TTGGCGACCT CATCGCCGAG GGTGTGTCGG GTCGGCGCGT CCTGGTGCGC 
GCCGACCTGA ACGTCCCCCT CGACGGCAGC AGGATCACCG ACGACGGCCG CGTCCGCGCG
TCGGTGCCCA CGATCAAGGC GCTCGTCGAC GCGGGCGCCC GCGTCCTCGT GGCCGCGCAC
CTGGGCCGCC CCAAGGGCGA GCCCGACCCC CAGTTCTCCC TCGCCCCGGT CGCCGCGCGG
CTGGGCGAGC TCCTCGGCCA GACCGTGGAG ATCGGGACCG AGACCGCCGG TGACGGCACC
GTGGTCCTGC TGGAGAACAT CCGCTTCGAC GCCCGCGAGA CCAGCAAGGA CGCCGCCGAG
CGCGAGGCGC TGGCGGACGA GCTGGCCGCG AAGGCCGACG CGTTCGTGTC CGACGGCTTC
GGCGTCGTGC ACCGCAAGCA GGCCTCCGTG TACGACGTGG CCAAGAAGCT CCCGCACTAC
GCCGGTGGGC TCGTGCTGGC CGAGGTCGAG GTGCTGCGCA AGCTCACCGA CGACACCCGG
CGCCCCTACG TCGTCGTCCT CGGCGGCGCG AAGGTCTCGG ACAAGCTCGG CGTCATCGAG
AACCTGCTCA CCAAGGTCGA CCGGCTCCTG GTCGGCGGCG GCATGGCCTA CACCTTCCTC
AAGGCCCAGG GCCACGAGGT CGGCAAGTCG CTGCTCCAGG AAGACCAGAT CGACAAGGTC
AAGGGCTTCC TGGCGGAGGC GGAGAAGCGC GGCGTCGAGC TGCTGCTCCC CGTCGACTTC
CTCGCCGCCA CCGGCTTCTC CGCCGACGCC GACCACACCG TGGTCGCCTT CGACGAGATC
CCGGCCGACC GCGAGTGCCT GGACATCGGC CCCGCCTCCC GCGAGCTGTT CGCCTCGAAG
CTCGCCGACG CGAAGACCGT GTTCTGGAAC GGCCCCATGG GCGTGTTCGA GTTCGAGAAG
TTCTCCGGCG GCACCCGCGC GGTGGCCGAG GCGCTGATCG CCAGCGAGGC GTTCACCGTC
GTCGGCGGCG GCGACTCCGC CGCCGCGGTC CGCTCCCTCG GCCTGCCCGA GGACGGCTTC
TCGCACATCT CCACCGGCGG CGGCGCGTCG CTGGAGTACC TGGAGGGCAA GGAGCTCCCC
GGCGTTTCCG TGCTGGAGGA GGACTGA
 
Protein sequence
MKTLGDLIAE GVSGRRVLVR ADLNVPLDGS RITDDGRVRA SVPTIKALVD AGARVLVAAH 
LGRPKGEPDP QFSLAPVAAR LGELLGQTVE IGTETAGDGT VVLLENIRFD ARETSKDAAE
REALADELAA KADAFVSDGF GVVHRKQASV YDVAKKLPHY AGGLVLAEVE VLRKLTDDTR
RPYVVVLGGA KVSDKLGVIE NLLTKVDRLL VGGGMAYTFL KAQGHEVGKS LLQEDQIDKV
KGFLAEAEKR GVELLLPVDF LAATGFSADA DHTVVAFDEI PADRECLDIG PASRELFASK
LADAKTVFWN GPMGVFEFEK FSGGTRAVAE ALIASEAFTV VGGGDSAAAV RSLGLPEDGF
SHISTGGGAS LEYLEGKELP GVSVLEED