Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5187 |
Symbol | |
ID | 8329389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6181224 |
End bp | 6182336 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644945626 |
Product | transaldolase |
Protein accession | YP_003102854 |
Protein GI | 256379194 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00876] transaldolase, mycobacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.125923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCGA AACCGCTGGC CGACCTCAGC GCCGCCGGTG TGTCGATCTG GCTCGACGAC CTGTCGCGCG AGCGGCTGGA CTCGGGCAAC CTGGCCGGGC TGATCGCGGA CAAGGCCGTG GTGGGCGTGA CCACCAACCC GACGATCTTC GCCGGCGCCC TGTCCAAGGG CGACGCCTAC GACGCGCAGG TGCGCGAGCT GGCCGCGCGC GGCGCCGACA CCGAGGCCGT GGTGCGCGAG ACCACCACGA CCGACGTGCG CAACGCGTGC GACCTGTTCC GCGACGTCTA CGCCAAGTCG AACGGCGTCG ACGGCCGGGT GTCCATCGAG GTGGACCCGC GCCTGGCCAA GGACACCGAC AAGACCGCCG CCGAGGCGCT CGACCTGTGG AAGGCCGTGG ACCGGCCGAA CCTCATGGTC AAGATCCCCG GCACGGTCGA GGGCCTGCCC GCGATCACCA AGACGCTCGG CGAGGGCGTC AGCGTGAACG TGACGCTGAT CTTCAGCACC GAGCGCTACC GCGCCGTGAT GGACGCCTAC CTGGCGGGCC TGGAGCTGGC CAAGTCCAAC GGCCACGACC TGCGCACGAT CCACTCGGTG GCGTCGTTCT TCGTGTCCCG CGTGGACAGC GAGATCGACA AGCGGCTGTC CGCCATCGGC ACCGACGAGG CCAAGTCCCT GCTGGGCAAG GCCGCGATCG CGAACGCCGT GCTGGCCTAC GCCGCCTACC AGGAGGTGTT CTCCGGCCCG CGCTGGGAGG CCCTCGCGGC GGACGGCGCG AACGCGCAGC GCCCGCTGTG GGCGTCGACC GGCGTGAAGG ACCCGAACTA CTCCGACACC CGGTACGTCG ACCAGCTGGT CGTCGACGGC GTGGTCAACA CCATGCCGGA GAAGACCCTG GACGCGGTCG CCGACCACGG TCAGATCACC GGTGACACGG TCACGGGCAA GGCCGACGAG GCGCAGGCCG TGTTCGACGC GATCGCGGCG GCGGGCGTCG ACGTGACCGA CGTCTTCGTC ACGCTGGAGA CCGAGGGCGT CGACAAGTTC GAGAAGTCCT GGGCCGAGCT GCTGGAGACC GTCACCGGTC AGCTGGAGAA GGCGAAGGGC TGA
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Protein sequence | MTAKPLADLS AAGVSIWLDD LSRERLDSGN LAGLIADKAV VGVTTNPTIF AGALSKGDAY DAQVRELAAR GADTEAVVRE TTTTDVRNAC DLFRDVYAKS NGVDGRVSIE VDPRLAKDTD KTAAEALDLW KAVDRPNLMV KIPGTVEGLP AITKTLGEGV SVNVTLIFST ERYRAVMDAY LAGLELAKSN GHDLRTIHSV ASFFVSRVDS EIDKRLSAIG TDEAKSLLGK AAIANAVLAY AAYQEVFSGP RWEALAADGA NAQRPLWAST GVKDPNYSDT RYVDQLVVDG VVNTMPEKTL DAVADHGQIT GDTVTGKADE AQAVFDAIAA AGVDVTDVFV TLETEGVDKF EKSWAELLET VTGQLEKAKG
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