Gene Amir_5182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5182 
Symbol 
ID8329384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp6175382 
End bp6176020 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content69% 
IMG OID644945621 
Producthypothetical protein 
Protein accessionYP_003102849 
Protein GI256379189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.671935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGATGA TCACTGCTGT TTCCACCGAG GTCGTGGAGA AGCGCGTGTG GCGGTTGTGC 
CAGGACCACG CGGCGAACCT CCAGTTCCAC GGCTGGCACC ACGTGAGCTT CGTGCGCGAC 
AAGGCCGTGC TGTTCGCGGG GCGCAACGGG GCGGACGTGG CGCTGGTCGA GGTGGCCGCG 
CTGGTGCACG ACGTCAACTA CGTGGTGCGC CGCAACTCGC TGCCCGTGGA CGGGCGGGAG 
CTGCGGATGG AGATCCTGGC GGACGCCGGG GTGCCCGACG AGGCGGCGCT GCGGGTCGAC 
GAGGTGGTCG AGGAGGCGGA GATGCGCACC CGCGACCGGT GGATCTCGGT CGAGGCGCAG 
GCGCTGTCCG ACGCCGACAC CCTGTTCAAG GCGTTACCGG TGACCCCGGT CGTGCTGGCG 
CCGAAGTACC TGCTGGAGAA CGGCATCACG CTCCGCCAGC TCGCGCACAA GATCGTCGGC 
GAGCAGCGGT CCAAGCACGA CGAGGGGTAC TACTTCTACG ACCCCCAGGC CGCCGCCCTG 
TACTCCAGGT GGGCGAGCGC GAACCTGGAG CTGTGGCAGT GCATCGTGGA GTCGCTGGAC 
GACCCGACGG TGGAGGAACT GCTGGCAGCG GTGCCCTAA
 
Protein sequence
MRMITAVSTE VVEKRVWRLC QDHAANLQFH GWHHVSFVRD KAVLFAGRNG ADVALVEVAA 
LVHDVNYVVR RNSLPVDGRE LRMEILADAG VPDEAALRVD EVVEEAEMRT RDRWISVEAQ 
ALSDADTLFK ALPVTPVVLA PKYLLENGIT LRQLAHKIVG EQRSKHDEGY YFYDPQAAAL 
YSRWASANLE LWQCIVESLD DPTVEELLAA VP