Gene Amir_5173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5173 
Symbol 
ID8329375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6166459 
End bp6166878 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content67% 
IMG OID644945612 
Productprotein of unknown function DUF485 
Protein accessionYP_003102840 
Protein GI256379180 
COG category[S] Function unknown 
COG ID[COG3162] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGG CGTTTCCGCC ACCGGTGGAA TCCCGGTACC AGCGGGCGGA CGCGCGGGGA 
TTCGCCACTT TCGACGATCC CGCACCCGCT CTGCTCGTCG ACGAGGACGG CAATCCGGAT
TACGTCGCGA TTCAGCAGAG CGAGGATTTC CGGGAACTGC GCAGGCGCAC CGCGGTGTTC
GTCGTGCCCG CCATCCTGGG ATTCCTCGCG TGGTACCTCG CGTACGTGGG CCTGTCCGCG
TTCGCGCCCG ACTTCATGGC CACCAGGGTG TTCGGCGTGG TCAACGTCGG CCTGCTGCTC
GGGCTGCTCC AGTTCGTCAC CACCATCGCC CTGACCTTGG GCTACTCCCG ATACGCCAGG
CTCCGGCTGG ACCCCAGGGT CGCCGCGGTC CGCGAGCTGA CCGACGAGGA CGGCATCTGA
 
Protein sequence
MTKAFPPPVE SRYQRADARG FATFDDPAPA LLVDEDGNPD YVAIQQSEDF RELRRRTAVF 
VVPAILGFLA WYLAYVGLSA FAPDFMATRV FGVVNVGLLL GLLQFVTTIA LTLGYSRYAR
LRLDPRVAAV RELTDEDGI