Gene Amir_5147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5147 
Symbol 
ID8329349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6137184 
End bp6137597 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content66% 
IMG OID644945586 
Productputative signal transduction protein with CBS domains 
Protein accessionYP_003102814 
Protein GI256379154 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.48852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCG CGCGAGAGAT CATGCACGCG GGCGTGATGT GCGTGCAGGA CAACCAGACG 
CTGGAGGAGG CGGCGGTGAT GATGCGGGAC ATGAAGGTCG GCTCGCTGCC GATCTGCGGG
AGCGACGACA AGCTCAAGGG CATCATCACC GACCGGGACA TCGTGATCAG CTGCGTCGCG
GCGGGCATCT CCCCCGCCGA CATGCGGGCC GGTCAGCTCG CGCGGAACCT GCACTGGGTG
GACGCGGACA CCGACATCAC CGACGTGCTG GAGACGATGG AGGTCAACCA GATCCGGCGC
ATCCCGGTGC TGGAGAACCA CCGCCTGGTG GGCATGGTCA GCGAGTCCGA CCTGGCCAAG
CACCTGGACG ACGACCAGCT CGCCGAGTTC ATCGAGCGGG TCTACTCCGA CTAG
 
Protein sequence
MTTAREIMHA GVMCVQDNQT LEEAAVMMRD MKVGSLPICG SDDKLKGIIT DRDIVISCVA 
AGISPADMRA GQLARNLHWV DADTDITDVL ETMEVNQIRR IPVLENHRLV GMVSESDLAK
HLDDDQLAEF IERVYSD