Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5128 |
Symbol | |
ID | 8329326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6108096 |
End bp | 6108908 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644945563 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003102795 |
Protein GI | 256379135 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATACCCG CCGGGTATCA CAGCGGGCGC AACGGGTCTT GGCGCTCCCG GCGCGACGAG CCGAGCATCG GTGGGGTGAA CGAGCAGAGG ACGGCGCTGG TGACCGGCGC GAACAAGGGG ATCGGCTACG CGATCGCGGC GGGCCTGGGC GCGCTGGGCC ACCGGGTCGG CGTGGGGGCG CGCGACGACG CGCGCCGCGA GGAGGCGGTG GCGCGGCTGC GCGCCGAGGG GGTGGACGCG TTCGGCGTGC CGCTGGACGT CACCGACGAC ACGAGCGTCG CGGCGGCGGC GCGGCAGCTG GAGGAGGCGG GGCACGGCCT GGACGTCCTG GTCAACAACG CGGGCATCTC CGGCGACCAC GCCCCCGACT GGTCGCAGGA CCCGACCGCG CTGGACCTGG CGGAGGCCCG CCGGGTGGTG GAGACGAACG TGTTCGGCGT GGTCCGGGTG ACCAACGCCC TGCTGCCGCT GCTGCGGCGG TCCGCGTCCC CGAGGGTCGT GAACATCTCC AGCAGCGTCG CGTCCCTGAC CAGGCAGGCG GACCCGGACG CGCAGAGCGG CCCGGTCATG GCGGTGTACG CGCCGACGAA GTCCTACCTG AACGCGCTGA CCGTGCAGTA CGCCCGGCAG CTGGCGGGCA CGGGCGTGCT GGTGAACGCG GCCTGCCCCG GTCTGGTGGC GACCGACTTC ACCGGGTTCC AGGCCCCGCG CACCCCCGAG CAGGGCGCGG TGGCGGCCCT GCGCCTGGCG ACCCTGCCCG ACGGCGGCCC GTCCGGCGGG TTCTTCGACG ACGAGGGCGC CCTGCCCTGG TGA
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Protein sequence | MIPAGYHSGR NGSWRSRRDE PSIGGVNEQR TALVTGANKG IGYAIAAGLG ALGHRVGVGA RDDARREEAV ARLRAEGVDA FGVPLDVTDD TSVAAAARQL EEAGHGLDVL VNNAGISGDH APDWSQDPTA LDLAEARRVV ETNVFGVVRV TNALLPLLRR SASPRVVNIS SSVASLTRQA DPDAQSGPVM AVYAPTKSYL NALTVQYARQ LAGTGVLVNA ACPGLVATDF TGFQAPRTPE QGAVAALRLA TLPDGGPSGG FFDDEGALPW
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