Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5019 |
Symbol | |
ID | 8329217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5979577 |
End bp | 5980500 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644945456 |
Product | hydroxymethylbutenyl pyrophosphate reductase |
Protein accession | YP_003102688 |
Protein GI | 256379028 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.276096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGAGTCC CACTCGTGCT GCTCGCCTCG CCCCGGTCGT TCTGCGCCGG GGTCGAGCGG GCGGTGGAGA TCGTCGAGGA GCTGCTGCGG CGGCGCGGCG GCCCGGTCCA CGTGCGCAAG CAGATCGTGC ACAACACGCA CGTGGTGGCG CGGCTGGAGT CGATGGGCGC GGTGTTCGTG GACGAGCTGG ACGAGGTGCC GGACGGGGCC GTGGTGGTGT TCTCCGCGCA CGGGGTGTCG CCCGCCGTGC GCGCCGAGGC CGAGCGGCGC GGGTTCGAGG TGGTCGACGC GACCTGCCCG CTGGTGACCA AGGTGCACGC GGAGGCGCGC CGGTTCGCCG GGCGCGGGGA CACCGTGGTG CTGATCGGGC ACGCCGGGCA CGAGGAGGTC GAGGGCACGC TCGGCGAGGC CCCGGACCGG ATGCTGCTGG TGGACGGCCC GGAGGCGGTG GCGGCGCTGG AGGTCGAGGA CCCGGAGCGG GTGTCGTACC TGATGCAGAC GACGCTGGCC GCGGACGAGG CGACCGAGGT CGTGGCGGCG CTGCGCAAGC GCTTCCCCGC ACTGCGCGGC CCCTCTTCGG ACGACATCTG CTACGCCACC ACGAACCGCC AAGAGGCGGT ACGGGAGGTG GCGCGCGAGG CCGATCTGGT CCTCGTGGTC GGTTCAGCGA ACTCATCCAA CTCGGCAAGG CTGGTGGAAC TGGTGCGCCG CGAGGGCGTG CCCGCCCACC TGATCGACGA CGTGCGCGAC CTGCGCCCGC GATGGCTGGA GGGGGTGCGC GTGGTGGGGT TGAGCGCGGG GGCGTCCGCG CCGCCGGGGC TGGTGGACGA GGTCGTGGCG GTGCTGGACG CGCACCGGGT CGAGGTGCGG GAGACCACCG TGGAGACCAT CCGGTTCACC CTGCCCGCCG CGGTGCGGAG GTGA
|
Protein sequence | MGVPLVLLAS PRSFCAGVER AVEIVEELLR RRGGPVHVRK QIVHNTHVVA RLESMGAVFV DELDEVPDGA VVVFSAHGVS PAVRAEAERR GFEVVDATCP LVTKVHAEAR RFAGRGDTVV LIGHAGHEEV EGTLGEAPDR MLLVDGPEAV AALEVEDPER VSYLMQTTLA ADEATEVVAA LRKRFPALRG PSSDDICYAT TNRQEAVREV AREADLVLVV GSANSSNSAR LVELVRREGV PAHLIDDVRD LRPRWLEGVR VVGLSAGASA PPGLVDEVVA VLDAHRVEVR ETTVETIRFT LPAAVRR
|
| |