Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5015 |
Symbol | |
ID | 8329213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5974243 |
End bp | 5974656 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644945452 |
Product | thioesterase superfamily protein |
Protein accession | YP_003102684 |
Protein GI | 256379024 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.168597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGCGAGC ACTACCCGCA CTGGCAGCGG GTCCCCACCC GGTGGGGCGA CAACGACGTG TACGGGCACG TCAACAACGT CGTCCACTAC GCGTTCATGG ACACGGTGAT CAACACCTGG CTGATCGGCG CGGGGCTGGA CATCCACGGC GGTCCCGCGA TCGGGCTGTG CGTCGAGTCG CACTGCTCCT ACCGGGCGGC CGTGGCGTTC CCCGACGCGC TCGACGCCGG GTTGCGCGTG GGGAAGCTGG GCGGCTCCAG CGTCCGGTAC GAGGTCGGCT TCTACCGCGA GGGGGCGGAC GAGCTGGTGG CGCAGGGGCA CTTCGTGCAC GTGTTCACCG ACCGGGGCAC CCGCAGGCCG GTGCCGATCC CGGACGGGTT GCGGGCGGCG ATGACCGGGC TGGTGGTCCC GTGA
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Protein sequence | MREHYPHWQR VPTRWGDNDV YGHVNNVVHY AFMDTVINTW LIGAGLDIHG GPAIGLCVES HCSYRAAVAF PDALDAGLRV GKLGGSSVRY EVGFYREGAD ELVAQGHFVH VFTDRGTRRP VPIPDGLRAA MTGLVVP
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