Gene Amir_5015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5015 
Symbol 
ID8329213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5974243 
End bp5974656 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content71% 
IMG OID644945452 
Productthioesterase superfamily protein 
Protein accessionYP_003102684 
Protein GI256379024 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.168597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCGAGC ACTACCCGCA CTGGCAGCGG GTCCCCACCC GGTGGGGCGA CAACGACGTG 
TACGGGCACG TCAACAACGT CGTCCACTAC GCGTTCATGG ACACGGTGAT CAACACCTGG
CTGATCGGCG CGGGGCTGGA CATCCACGGC GGTCCCGCGA TCGGGCTGTG CGTCGAGTCG
CACTGCTCCT ACCGGGCGGC CGTGGCGTTC CCCGACGCGC TCGACGCCGG GTTGCGCGTG
GGGAAGCTGG GCGGCTCCAG CGTCCGGTAC GAGGTCGGCT TCTACCGCGA GGGGGCGGAC
GAGCTGGTGG CGCAGGGGCA CTTCGTGCAC GTGTTCACCG ACCGGGGCAC CCGCAGGCCG
GTGCCGATCC CGGACGGGTT GCGGGCGGCG ATGACCGGGC TGGTGGTCCC GTGA
 
Protein sequence
MREHYPHWQR VPTRWGDNDV YGHVNNVVHY AFMDTVINTW LIGAGLDIHG GPAIGLCVES 
HCSYRAAVAF PDALDAGLRV GKLGGSSVRY EVGFYREGAD ELVAQGHFVH VFTDRGTRRP
VPIPDGLRAA MTGLVVP