Gene Amir_4955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4955 
Symbol 
ID8329153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5909924 
End bp5910580 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content77% 
IMG OID644945395 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003102627 
Protein GI256378967 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00123858 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGGAGA CGAGCACCGG ACCGGGGACG GGCACCGGGC TGGAGGCCAT CACCAGGCTG 
GGCGCGGGCA CGCCCGACGC GCTGCGGCCC GTGCTGGAGC CGCTGCCCGA GCTGACCCCG 
GCGGGCGTCC GGCTGCTGGA CGCGGCGAGC GGGCTGTTCC AGGACCGGGG CGTGCGGGCG 
GTCGGGGTCG ACCTGATCGC GGAGACCGCG GGGACGACGA AGAAGACGCT GTACGACCGG 
TTCGGCTCCA AGGACGCGCT CGTCGCGCTG TACCTGCTGC ACCGGGCGCA CCGGTGGCGC 
GAGCACGTGC TGGCCGCGCT GGGCGGCGGT TCGGCGCGGG CTCGGGTGCT GCGGGTGTTC 
GACGCGCTGG AGACGTGGGT GGGCGAGCGG TCGCGCGGGT GCGCGTTCGT GGGCGCGTAC 
GCCGAGATCG GCGACGGCGA CCACCCGGCG GTGCCCGTGG TGCGGGCGGA GAAGGCGTGG 
ATGCGGGCGC TGTTCGTCGC ACTCGCGGGT GACCCCGGAC TGGGGGCGCA CCTGCACCTG 
GTCTACGAGG GGACACTGGT CGCGCTGACG GCGGGCGGGG ACCCGGAGGC GGTGGCGGAG 
GGCAGGCGCG CGGTCCGCCT CGCCATGGGG GCCAGTCGCG GCGCGGGTTC CGCGTAA
 
Protein sequence
MRETSTGPGT GTGLEAITRL GAGTPDALRP VLEPLPELTP AGVRLLDAAS GLFQDRGVRA 
VGVDLIAETA GTTKKTLYDR FGSKDALVAL YLLHRAHRWR EHVLAALGGG SARARVLRVF 
DALETWVGER SRGCAFVGAY AEIGDGDHPA VPVVRAEKAW MRALFVALAG DPGLGAHLHL 
VYEGTLVALT AGGDPEAVAE GRRAVRLAMG ASRGAGSA